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    <title>Action Potential</title>
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   <id>tag:blogs.nature.com,2008:/nn/actionpotential/5</id>
    <link rel="service.post" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5" title="Action Potential" />
    <updated>2008-04-30T20:01:45Z</updated>
    <subtitle>Action Potential is a blog by the editors of Nature Neuroscience – a forum for our readers, authors, and the entire neuroscience community. We’ll discuss what’s new and exciting in our journal, other journals, and neuroscience in general. We hope for spirited conversation on papers and policies. Comments will be reviewed before being published. You can be as critical or controversial as you like, but please don&apos;t get personal or discourteous, and please stay on topic. Thank you.</subtitle>
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<entry>
    <title>Nature Network Journal Club: Curbing cocaine addiction using gene therapy</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/ng_nature_network_journal_club_cu.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5292" title="Nature Network Journal Club: Curbing cocaine addiction using gene therapy" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5292</id>
    
    <published>2008-04-30T19:28:42Z</published>
    <updated>2008-04-30T20:01:45Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper discusses a potential therapeutic strategy involving the upregulation of the dopamine receptor D2R that may be beneficial in the treatment of cocaine abuse and...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1479">live</a>. The <a href="http://www3.interscience.wiley.com/journal/118640424/abstract">paper</a> discusses a potential therapeutic strategy involving the upregulation of the dopamine receptor D2R that may be beneficial in the treatment of cocaine abuse and addiction. </p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://network.nature.com/profile/UA3A50233">Áine Duffy</a>, a postdoctoral fellow at Weill-Cornell Medical College in New York. I want to thank Áine for her participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Nature Neuroscience turns 10!</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/top_papers.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5270" title="&lt;em&gt;Nature Neuroscience&lt;/em&gt; turns 10!" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5270</id>
    
    <published>2008-04-25T18:20:29Z</published>
    <updated>2008-04-25T19:48:39Z</updated>
    
    <summary>Our May editorial takes a brief look back at some of the history of Nature Neuroscience. We also present some of the most-cited papers over the past decade. This is an interesting exercise, as it provides an opportunity to reflect...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--1-->What's New in NN?]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>Our <a href="http://www.nature.com/neuro/journal/v11/n5/full/nn0508-521.html">May editorial</a> takes a brief look back at some of the history of <em>Nature Neuroscience</em>. We also present some of the most-cited papers over the past decade. This is an interesting exercise, as it provides an opportunity to reflect on the interests of both the authors and readers over the past decade.</p>]]>
        <![CDATA[<p>As promised in the editorial, here is a list of most highly cited paper from each year of the journals publication, up until 2005 (going beyond that, things get a little unreliable since the citation half-life is usually quoted as being somewhere between 2-3 years):</p>

<p><br />
<strong>1998</strong>: <em>Nature Neuroscience</em>  <strong>1</strong>, 69 - 73 (1998) ; doi:10.1038/271 <br />
<a href="http://www.nature.com/neuro/journal/v1/n1/full/nn0598_69.html">Cortisol levels during human aging predict hippocampal atrophy and memory deficits</a><br />
Sonia J. Lupien, Mony de Leon, Susan de Santi, Antonio Convit, Chaim Tarshish, N. P. V. Nair, Mira Thakur, Bruce S. McEwen, Richard L. Hauger & Michael J. Meaney<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0032057656&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a120&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a12">447 citations</a></p>

<p><br />
<strong>1999</strong>: <em>Nature Neuroscience</em>  <strong>2</strong>, 266 - 270 (1999) ; doi:10.1038/6368 <br />
<a href="http://www.nature.com/neuro/journal/v2/n3/full/nn0399_266.html">Running increases cell proliferation and neurogenesis in the adult mouse dentate gyrus</a><br />
Henriette van Praag, Gerd Kempermann & Fred H. Gage <br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033360314&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a210&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a21">839 citations</a></p>

<p> <br />
<strong>2000</strong>: <em>Nature Neuroscience</em>  <strong>3</strong>, 1301 - 1306 (2000) ; doi:10.1038/81834 <br />
<a href="http://www.nature.com/neuro/journal/v3/n12/full/nn1200_1301.html">Chronic systemic pesticide exposure reproduces features of Parkinson's disease</a><br />
Ranjita Betarbet, Todd B. Sherer, Gillian MacKenzie, Monica Garcia-Osuna, Alexander V. Panov & J. Timothy Greenamyre<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033681149&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a280&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a28">876 citations</a></p>

<p><br />
<strong>2001</strong>:<em> Nature Neuroscience</em>  <strong>4</strong>, 95 - 102 (2001) ; doi:10.1038/82959 <br />
<a href="http://www.nature.com/neuro/journal/v4/n1/full/nn0101_95.html">Abstract reward and punishment representations in the human orbitofrontal cortex</a><br />
J. O'Doherty, M. L. Kringelbach, E. T. Rolls, J. Hornak & C. Andrews<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0035152958&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a350&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a35">454 citations</a></p>

<p> <br />
<strong>2002</strong>: <em>Nature Neuroscience</em>  <strong>5</strong>, 452 - 457 (2002) ; doi:10.1038/nn842 <br />
<a href="http://www.nature.com/neuro/journal/v5/n5/full/nn842.html">Immunization reverses memory deficits without reducing brain A burden in Alzheimer's disease model</a><br />
Jean-Cosme Dodart, Kelly R. Bales, Kimberley S. Gannon, Stephen J. Greene, Ronald B. DeMattos, Chantal Mathis, Cynthia A. DeLong, Su Wu, Xin Wu, David M. Holtzman & Steven M. Paul<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0036240395&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a420&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a42">317 citations</a></p>

<p> <br />
<strong>2003</strong>: <em>Nature Neuroscience</em>  <strong>6</strong>, 43 - 50 (2002) ; doi:10.1038/nn980 <br />
<a href="http://www.nature.com/neuro/journal/v6/n1/full/nn980.html">Neuron-to-astrocyte signaling is central to the dynamic control of brain microcirculation</a><br />
Micaela Zonta, María Cecilia Angulo, Sara Gobbo, Bernhard Rosengarten, Konstantin-A. Hossmann, Tullio Pozzan & Giorgio Carmignoto<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0037223147&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a490&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a49">292 citations</a></p>

<p><br />
<strong>2004</strong>: <em>Nature Neuroscience</em>  <strong>7</strong>, 847 - 854 (2004) ; doi:10.1038/nn1276 <br />
<a href="http://www.nature.com/neuro/journal/v7/n8/full/nn1276.html">Epigenetic programming by maternal behavior</a><br />
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf & Michael J Meaney<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-3342989681&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a560&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a56">413 citations</a></p>

<p><br />
<strong>2005</strong>: <em>Nature Neuroscience</em>  <strong>8</strong>, 828 - 834 (2005) ;  doi:10.1038/nn1463 <br />
<a href="http://www.nature.com/neuro/journal/v8/n6/full/nn1463.html">5-HTTLPR polymorphism impacts human cingulate-amygdala interactions: a genetic susceptibility mechanism for depression</a><br />
Lukas Pezawas, Andreas Meyer-Lindenberg, Emily M Drabant, Beth A Verchinski, Karen E Munoz, Bhaskar S Kolachana, Michael F Egan, Venkata S Mattay, Ahmad R Hariri & Daniel R Weinberger<br />
<a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-22844433107&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a630&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a63">236 citations</a></p>

<p><br />
And, the Top 10 overall:</p>

<p><br />
<strong>1.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033681149&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a280&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a28">876 citations</a><br />
<em>Nature Neuroscience</em>  <strong>3</strong>, 1301 - 1306 (2000) ; doi:10.1038/81834 <br />
<a href="http://www.nature.com/neuro/journal/v3/n12/full/nn1200_1301.html">Chronic systemic pesticide exposure reproduces features of Parkinson's disease</a><br />
Ranjita Betarbet, Todd B. Sherer, Gillian MacKenzie, Monica Garcia-Osuna, Alexander V. Panov & J. Timothy Greenamyre</p>

<p><br />
<strong>2.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033360314&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a210&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a21">839 citations</a><br />
<em>Nature Neuroscience</em>  <strong>2</strong>, 266 - 270 (1999) ; doi:10.1038/6368 <br />
<a href="http://www.nature.com/neuro/journal/v2/n3/full/nn0399_266.html">Running increases cell proliferation and neurogenesis in the adult mouse dentate gyrus</a><br />
Henriette van Praag, Gerd Kempermann & Fred H. Gage</p>

<p><br />
<strong>3.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033363319&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a730&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a73">746 citations</a><br />
<em>Nature Neuroscience</em>  <strong>2</strong>, 260 - 265 (1999) ; doi:10.1038/6365<br />
<a href="http://www.nature.com/neuro/journal/v2/n3/full/nn0399_260.html">Learning enhances adult neurogenesis in the hippocampal formation</a><br />
Elizabeth Gould, Anna Beylin, Patima Tanapat, Alison Reeves & Tracey J. Shors</p>

<p><br />
<strong>4.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033305929&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a770&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a77">595 citations</a><br />
<em>Nature Neuroscience</em>  <strong>2</strong>, 861 - 863 (1999) ; doi:10.1038/13158<br />
<a href="http://www.nature.com/neuro/journal/v2/n10/full/nn1099_861.html">Brain development during childhood and adolescence: a longitudinal MRI study</a><br />
Jay N. Giedd, Jonathan Blumenthal, Neal O. Jeffries, F. X. Castellanos, Hong Liu, Alex Zijdenbos, Tomá Paus, Alan C. Evans & Judith L. Rapoport</p>

<p><br />
<strong>5.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0033946468&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a800&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a80">509 citations</a><br />
<em>Nature Neuroscience</em>  <strong>3</strong>, 661 - 669 (2000) ; doi:10.1038/76615 <br />
<a href="http://www.nature.com/neuro/journal/v3/n7/full/nn0700_661.html">Proteomic analysis of NMDA receptor−adhesion protein signaling complexes</a><br />
Holger Husi, Malcolm A. Ward, Jyoti S. Choudhary, Walter P. Blackstock & Seth G. N. Grant</p>

<p><br />
<strong>6.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0034051066&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a830&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a83">476 citations</a><br />
<em>Nature Neuroscience</em>  <strong>3</strong>, 292 - 297 (2000) ; doi:10.1038/73009 <br />
<a href="http://www.nature.com/neuro/journal/v3/n3/full/nn0300_292.html">Voluntary orienting is dissociated from target detection in human posterior parietal cortex</a><br />
Maurizio Corbetta, J. Michelle Kincade, John M. Ollinger, Marc P. McAvoy & Gordon L. Shulman</p>

<p><br />
<strong>7.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0035152958&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a350&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a35">454 citations</a><br />
<em> Nature Neuroscience</em>  <strong>4</strong>, 95 - 102 (2001) ; doi:10.1038/82959 <br />
<a href="http://www.nature.com/neuro/journal/v4/n1/full/nn0101_95.html">Abstract reward and punishment representations in the human orbitofrontal cortex</a><br />
J. O'Doherty, M. L. Kringelbach, 2, E. T. Rolls, J. Hornak & C. Andrews</p>

<p><br />
<strong>8.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0032057656&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a120&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a12">447 citations</a><br />
<em>Nature Neuroscience</em>  <strong>1</strong>, 69 - 73 (1998) ; doi:10.1038/271 <br />
<a href="http://www.nature.com/neuro/journal/v1/n1/full/nn0598_69.html">Cortisol levels during human aging predict hippocampal atrophy and memory deficits</a><br />
Sonia J. Lupien, Mony de Leon, Susan de Santi, Antonio Convit, Chaim Tarshish, N. P. V. Nair, Mira Thakur, Bruce S. McEwen, Richard L. Hauger & Michael J. Meaney</p>

<p><br />
<strong>9.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-0034056319&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a860&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a86">435 citations</a><br />
<em>Nature Neuroscience</em>  <strong>3</strong>, 284 - 291 (2000) ; doi:10.1038/72999<br />
<a href="http://www.nature.com/neuro/journal/v3/n3/full/nn0300_284.html">The neural mechanisms of top-down attentional control</a><br />
J. B. Hopfinger, M. H. Buonocore & G. R. Mangun</p>

<p><br />
<strong>10.</strong> <a href="http://www.scopus.com/scopus/results/citedbyresults.url?sort=plf-f&cite=2-s2.0-3342989681&src=s&imp=t&sid=jh4MvqEBT9tI5xun2lF5QQf%3a560&sot=cite&sdt=a&sl=0&origin=resultslist&txGid=jh4MvqEBT9tI5xun2lF5QQf%3a56">413 citations</a><br />
<em>Nature Neuroscience</em>  <strong>7</strong>, 847 - 854 (2004) ; doi:10.1038/nn1276 <br />
<a href="http://www.nature.com/neuro/journal/v7/n8/full/nn1276.html">Epigenetic programming by maternal behavior</a><br />
Ian C G Weaver, Nadia Cervoni, Frances A Champagne, Ana C D'Alessio, Shakti Sharma, Jonathan R Seckl, Sergiy Dymov, Moshe Szyf & Michael J Meaney</p>

<p><br />
An interesting list that spans quite a few sub-disciplines, hopefully reflecting our attempt at balance when covering all fields for our broad readership. What interesting trends do you see? Any interesting developments that you find surprising or completely expected? I look forward to reading your analysis.</p>]]>
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Giving sounds the silent treatment </title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/nature_network_journal_club_gi.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5204" title="Nature Network Journal Club: Giving sounds the silent treatment " />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5204</id>
    
    <published>2008-04-17T15:36:16Z</published>
    <updated>2008-04-17T15:43:18Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper provides evidence that in unanesthetized animals, sounds are sparsely represented in the auditory cortex. The contributor discussing this paper for the neuroscience group is...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1383">live</a>. The <a href="http://biology.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pbio.0060016">paper</a> provides evidence that in unanesthetized animals, sounds are sparsely represented in the auditory cortex. </p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://network.nature.com/profile/U711665CE">Lizzie Buchen</a>, a science writer for <a href="http://discovermagazine.com/"><em>Discover Magazine</em></a> in New York. I want to thank Lizzie for her participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Big Pharma and academia becoming more and more cozy</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/big_pharma_and_academia_becomi.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5169" title="Big Pharma and academia becoming more and more cozy" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5169</id>
    
    <published>2008-04-14T22:22:46Z</published>
    <updated>2008-04-14T23:44:46Z</updated>
    
    <summary>I recently attended the Alzheimer&apos;s Disease Keystone meeting in Keystone, CO and became more acutely aware of something than ever before: academia and drug companies really like one another. Sure, the latter always loved the former, since collaborating with university-based...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--4-->Science Policy]]>" />
            <category term="<![CDATA[<!--7-->Random Thoughts]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>I recently attended the <a href="http://www.keystonesymposia.org/Meetings/ViewMeetings.cfm?MeetingID=959&utm_source=0708Catalog&utm_medium=959&AllowFutureView=1&CFID=702930&CFTOKEN=39716067">Alzheimer's Disease Keystone meeting</a> in Keystone, CO and became more acutely aware of something than ever before: academia and drug companies really like one another. Sure, the latter always loved the former, since collaborating with university-based scientists often made the publications arising from the private sector look a little more legit. On the contrary, the reciprocity in this relationship has not always been there. There is without a doubt some sub-disciplinary differences in this complex relationship, but in the basic science departments that I lurked around, if you were associated with a company (or worse, left academia for a position there, succumbing to the power of the Dark Side), there was always talk of whether or not you could be trusted. Because companies need publications to prove the legitimacy of their product, right? And the legitimacy determines how much money everyone makes, right? So with such conflicts of interest, could the scientist, or the data being produced by these people, be trusted?</p>]]>
        <![CDATA[<p>That about sums up the position I feel a lot of academics have taken in the past. But before some commenter blows a gasket defending the ethics of research in the private sector, please understand that I am not trying to question the moral fabric of anyone holding a pipetteman in one hand and stock options in the other. I am simply reporting what <em>my</em> impression was from my peers in university department(s) and from other "non-profit" scientists with whom I associated. Obviously, the stereotype I am describing is flawed, but it is (was?) still one of those non-PC opinions (sometimes not so) secretly held by many an academic. But after what I observed at this AD meeting, I think that I can officially say that the hatchet has been buried and apparently, if you don't have a slide in your talk disclosing your potential private sector conflicts, then your lab is either financially-challenged, or you are a taxonomist. Why the big change? That's easy --- money. With the ever-widening gap between the number of NIH proposal submissions and the funding line, academic labs, now more than ever, need to find additional sources of money. It's funny how being broke will make a person change his/her mind about something...</p>

<p>Philanthropic entities, like the <a href="http://www.simonsfoundation.org/">Simons Foundation</a>, <a href="http://www.mcknight.org/">McKnight Foundation</a>, and the <a href="http://www.pewtrusts.org/">Pew Charitable Trusts</a>, have in the past, and are currently supporting, academic neuroscience research in a variety of ways. However, this source of funding is still not large enough to significantly shrink the gap. Enter Big Pharma, and little biotech, for that matter. The relationship between company and academic lab can take a variety of forms; from collaborative reagent testing/sharing, to complete underwriting of whole parts of the academic lab's program. At the meeting, I talked to PIs, post-docs and students regarding this relationship and everyone seemed to be extremely comfortable and happy with the arrangement. The companies, to their credit, see an obvious need, and are enthusiastically filling it. How enthusiastically? In one instance, a company that was collaborating with an academic lab flew a representative to this AD meeting, if only to hang up a poster for the researcher and remove it after the session was over. These previously-uneasy bedfellows are really not so much anymore. Certainly, there are fields that do not have strong ties to industry, but based on my conversations and observations, those unfortunate researchers tragically working in such areas are not avoiding contact out of elitist machismo, or fear of some "unholy" moral corruption, but rather, because they just haven't found a good "hook" to convince a company their lab's work could reap products or information that could eventually improve the company's bottom line. </p>

<p>I don't really see too many people raising an eyebrow anymore when they are told about a certain academic leaving for industry. The stigma is just not there, like it was when I was a graduate student (when I sat as the student representative on my graduate school admissions board, there was often talk of accepting only students who we could predict were more likely to do something "productive" with their future, and not throw away their education by going into the private sector). In addition, companies, more than ever, are encouraging their scientist employees to work on projects that are not necessarily related to specific product development goals, but rather have basic inquiry as the motivating factor (like at <a href="http://www.gene.com/gene/index.jsp?hl=en&rls=GGLD,GGLD:2004-37,GGLD:en&pwst=1&sa=X&oi=spell&resnum=0&ct=result&cd=1&q=genentech&spell=1">Genentech</a>). In my opinion, by loosening the scope of the research they choose to fund, companies place themselves in a better position to attract elite scientists. These strong thinkers bring obvious intellectual capital to the table, assisting with the company's product development, and are simultaneously kept happy because of the intellectual freedom to pursue other projects. This can only enrich and grow the entire creative research process within the company. So, for the moment, the strong marriage between academia and industry seems to be good for science as a whole. But how long will the honeymoon last?</p>]]>
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Neuronal dynamics mediate efficient coding</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/nature_network_journal_club_ne.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5121" title="Nature Network Journal Club: Neuronal dynamics mediate efficient coding" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5121</id>
    
    <published>2008-04-08T19:41:25Z</published>
    <updated>2008-04-08T19:55:37Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper discusses the role for brief adaptation in the improvement of population-based encoding accuracy during sensory information processing. The contributor discussing this paper for the...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1327">live</a>. The <a href="http://www.nature.com/nature/journal/v452/n7184/abs/nature06563.html">paper</a> discusses the role for brief adaptation in the improvement of population-based encoding accuracy during sensory information processing.</p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://www.columbia.edu/cu/biology/student-data/adam-packer/student.html">Adam Packer</a>, a graduate student at Columbia University in the lab of <a href="http://www.columbia.edu/cu/biology/faculty/yuste/">Rafa Yuste</a>. I want to thank Adam for his participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>What to do with your unfunded proposals - place them in a centralized repository? </title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/04/what_to_do_with_your_unfunded.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5064" title="What to do with your unfunded proposals - place them in a centralized repository? " />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5064</id>
    
    <published>2008-04-01T22:34:59Z</published>
    <updated>2008-04-09T15:15:19Z</updated>
    
    <summary>I would say no. Grant proposals are a precious commodity, especially in this day and age of reduced funding and evaporating money. However, in a recent Nature correspondence, Dr. Noam Harel describes his vision for a centralized grant repository, ideally...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--4-->Science Policy]]>" />
            <category term="<![CDATA[<!--7-->Random Thoughts]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>I would say no. Grant proposals are a precious commodity, especially in this day and age of reduced funding and evaporating money. However, in a recent <a href="http://www.nature.com/nature/journal/v452/n7186/full/452409b.html"><em>Nature</em> correspondence</a>, Dr. Noam Harel describes his vision for a centralized grant repository, ideally open to the public, where researchers could place their best ideas, allowing various funding agencies to discover the plans most-suited to their respective agendas. Dr. Harel likens this potential web manifestation to something like eBay, Facebook or Google, but for scientists and funding agencies. A more apt analogy might be <a href="http://www.monster.com/">Monster.com</a>, with both sides searching for their ideal match, and a long-term relationship (perhaps I am now making it sound more like <a href="http://www.eharmony.com/">eHarmony.com</a>...).</p>

<p>When it comes to the integration of scientific communication and technology, I am extremely optimistic, and although I don't reject Dr. Harel's idea entirely, I just don't see it taking off in its presently-proposed form.</p>]]>
        <![CDATA[<p>Grant writing is one of the most time-consuming and challenging parts of an academic scientist's life. S/he knows <em>what</em> needs to be done and <em>how</em> to produce a cool result, but translating these actions into words that the <a href="http://www.cartoonbank.com/item/120787">evil, intimidating and blood-thirsty study section</a> will find appealing takes patience and care, taking much precious time away from bench work. This leads to my #1 reason why this sort of repository would not work: there is simply too much competition out there to risk losing essential intellectual capital. </p>

<p>Sure, I bemoaned the lack of unpublished data being presented at meetings <a href="http://blogs.nature.com/nn/actionpotential/2007/07/paranoia_in_research_justified_1.html">in this blog before</a>, but I draw a distinction here. Presenting unpublished data ready for public consumption is still a vastly safer endeavor than publicly revealing one's approaches for tackling an interesting problem or creating new research tools. In addition, there are countless stories in science describing how one particular experimental strategy looked odd or downright foolish, at least until it produced a fantastic result. It is always exciting to reveal one's seemingly foolish strategy once it has been successful, but until then, most people would rather pursue their hair-brained ideas by themselves. Come on, how many of you out there <em>didn't </em>have a "secret project" that you never told your PI about, at least not until after it worked? Sometimes, we don't want public criticism when we are in brainstorming mode, begrudgingly granting an exception to our study section colleagues. </p>

<p>Guarding potentially wacky experimental escapades is similar to the secretive nature that soon-to-be parents adopt regarding their selected baby names. They are not going to tell you the names until after the birth of the child because, frankly, they don't want your feedback. After the birth certificate has already been filed, you, being the politically-correct individual that you are, will oblige them by complementing on their selection, since it is obviously too late to change anything. I feel the same concept applies to research that yields positive results. I am not suggesting that scientists shouldn't or don't discuss their potential experiments with others, but bouncing ideas off of trusted lab mates and posting them in a public repository are very different beasts. I simply feel that scientists are far from reaching the comfort level required to lay bare their most intimate experimental designs to the general public without first fully testing them to see if they work.</p>

<p>Hindsight is always 20/20. Most of the time, reviewer comments, whether on a publication or an RO1 proposal, are fairly constructive and can improve a paper or grant. After receiving feedback from a small group of peers (the study-section included), the grant writer will likely adopt certain suggestions, and modify other portions of the grant. This makes the proposal a better document and more likely to be funded by the agency represented by the original reviewers, or perhaps by another funding organization, if the author decides to try his/her luck elsewhere. Since any astute reviewer would likely detect the same major flaws, it would serve the author well NOT to leave the grant in a repository, but to instead modify and revise it for the next assessment. What advantage is it to the researcher, or to another funding agency, to have a sub-par grant evaluated again, using up precious time and reviewing resources? Of course, the public repository could be made so that new versions of the grant could be uploaded, appending the older version, but in the interim as the author is revising the grant (which can take months), the weaker version would be sitting there possibly turning off potential agencies (who may not bother to even look at a revision if they found the original version unsuitable) or causing confusion if the authors decide to move in a different scientific direction, with the revised proposal scarcely resembling its parent.</p>

<p>Currently, this grant repository does not exist, but could pre-print servers, like <a href="http://precedings.nature.com/"><em>Nature Precedings</em></a>, act in its place? After all, although they are currently not posting user-submitted research proposals, <em>Precedings</em> has listed some <a href="http://precedings.nature.com/tags/proposal">open science proposals</a>. There may even be some interest in this submission category, as indicated by <a href="http://researchremix.wordpress.com/2008/04/02/a-centralized-proposal-repository/trackback/">a recent blog post</a>. Do I think that this is a good use of <em>Nature Precedings</em>? The answer is no. A preprint server and grant repository are separate entities and should remain as such. Mixing proposals and non-peer-reviewed research would not benefit the community and could potentially cause confusion regarding the mission of the preprint server. I think that the editors of <em>Precedings</em> are following the right course by limiting the submissions to data and completed experiments. Which means that the preliminary data in grants would be perfectly appropriate to submit, but let's leave out the "Aims" sections. </p>

<p>I mentioned at the beginning of this post that I didn't entirely reject Dr. Harel's idea. The mixing and matching of proposals and agencies, akin to my Monster.com reference, is not a bad one and could work. It is often hard for scientists to keep up with all of the new private foundations and charitable entities willing to provide millions of dollars to push progress in their favorite research area. But perhaps I could limit the scope of Dr. Harel's proposal and suggest that any centralized repository would provide a simple one-page form allowing a laboratory to briefly detail their interests and loosely describe their plans, providing just enough information for the funding agency to "invite" the full proposal, if appropriate, while protecting the ideas of the scientist from general public exposure. These characteristics could potentially promote increased participation by those writing the proposals. With application requests and applications in  the same place,  it would only be a matter of time before the two found one another. This "limited scope" model of the repository would also still provide a means to preserve Dr. Harel's other good ideas of encouraging joint-funding (if two agencies are both interested in the same project), or inspiring collaborative projects between labs seeking to examine the same questions.</p>

<p>I guess I'll get to work pitching my twist on this idea to the people controlling the money dedicated to special projects here at NPG and see if we can get "Nature Grant Matchmaker" off the ground...</p>]]>
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Getting a GRASP on synapse location</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/nature_network_journal_club_ge_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5042" title="Nature Network Journal Club: Getting a GRASP on synapse location" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5042</id>
    
    <published>2008-03-30T19:09:07Z</published>
    <updated>2008-03-30T19:27:08Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper proposes a new strategy to track the location of select synapses using split fluorescent proteins. The contributor discussing this paper for the neuroscience group...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1263">live</a>. The <a href="http://www.neuron.org/content/article/abstract?uid=PIIS0896627307010203">paper</a> proposes a new strategy to track the location of select synapses using split fluorescent proteins.</p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://brainwindows.wordpress.com/">Andrew Hires</a>, a postdoctoral fellow at Janelia Farm Research Campus in the lab of <a href="http://www.hhmi.org/research/groupleaders/looger_bio.html">Loren Looger</a>. I want to thank Andrew for his participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>NN Joins Neuroscience Peer Review Consortium</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/nprc.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=5014" title="NN Joins Neuroscience Peer Review Consortium" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.5014</id>
    
    <published>2008-03-26T16:21:20Z</published>
    <updated>2008-03-26T17:25:02Z</updated>
    
    <summary>When the community is overburdened by peer review, it&apos;s everybody&apos;s problem. As of today, Nature Neuroscience has become part of the solution by joining the Neuroscience Peer Review Consortium, a flexible system that allows voluntary participation by authors, referees and...</summary>
    <author>
        <name>Sandra Aamodt</name>
        <uri>http://www.nature.com/natureneuroscience</uri>
    </author>
            <category term="<![CDATA[<!--1-->What's New in NN?]]>" />
            <category term="<![CDATA[<!--5-->Other Contributors]]>" />
            <category term="<![CDATA[<!--5-->Scientific Publishing]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>When the community is overburdened by peer review, it's everybody's problem. As of today, <em>Nature Neuroscience</em> has become part of the solution by joining the <a href="http://nprc.incf.org">Neuroscience Peer Review Consortium</a>, a flexible system that allows voluntary participation by authors, referees and editors. Here are more details, from our April <a href="http://www.nature.com/neuro/journal/v11/n4/full/nn0408-375.html">editorial</a>:</p>]]>
        <![CDATA[<p>The NPRC reduces the overall reviewing workload of the community by allowing authors to continue the initial review process when their paper moves from one consortium journal to another, once the paper has been rejected or withdrawn from the first journal. This arrangement is similar to the manuscript transfer system that has been available within the Nature family of journals for almost a decade. So far, more than 30 journals, including the <em>Journal of Neuroscience</em>, have become members of the NPRC, representing a substantial fraction of mainstream journals in the field. The full list of <a href="http://nprc.incf.org/journals">journals </a>can be found on the NPRC website.</p>

<p>Like the Nature journals' transfer system, the NPRC system is completely voluntary for authors. Editors at one journal know that a paper was reviewed elsewhere only if the author chooses to inform them. If the reviews from the first journal do not seem likely to facilitate acceptance at another journal, the authors are welcome to send the paper to the second journal directly and have the paper considered as a fresh submission. However, if the author feels that the reviews may be helpful, transferring them can accelerate the editorial process at the second journal, reducing publication delays. Each journal will transfer reviews only once, to ensure that each transfer includes the paper's full transfer history within the NPRC system. That is, once the paper has been considered by a second journal, only that journal can transfer the reviews to a third journal.</p>

<p>Referees also have the option of whether to participate in the transfer system. When they review a paper, they are asked to state whether the editors may release their names along with the review in the event that the paper is transferred to another journal. If a referee declines, that review is passed along to the next journal anonymously. It is most helpful to the recipient journal if the reviews are accompanied by the identities of the referees, so we strongly encourage our referees to participate in the NPRC system whenever possible. All editors within the consortium are committed to maintaining the confidentiality of transferred reviews, just as they would for their own review process, and do not reveal the referees' identities to the authors.</p>

<p>Finally, editors have full discretion in deciding how to use transferred reviews. The receiving editor may choose to accept or reject a paper based on these reviews, without further consideration; to send the paper to some or all of the previous referees for evaluation of the authors' revisions; or to request a fresh set of reviews from new referees.</p>

<p>Only comments to the authors are transferred to the receiving journal. Confidential comments to the editors are not passed along. Thus, to ensure transparency in the review process, both at Nature Neuroscience and at other journals after the paper has been transferred, we encourage referees to include all their concerns about the paper in comments to the authors. The small amount of extra time required to word the comments diplomatically for the authors should be more than counterbalanced by the resulting improvement in the peer review process. Many members of the community have strong views on the issue of <a href="http://blogs.nature.com/nn/actionpotential/2007/11/confidential_comments_your_opi.html">confidential comments</a>, which can be found on our blog, Action Potential.</p>

<p>Referees should use comments to the editors to communicate ethical concerns and for comments that may reveal their identity or other confidential information; for example, to compare the paper to a related paper under consideration that they have also been asked to evaluate. Comments to editors should also be used to indicate whether or not the referee is willing to have his or her name revealed to the receiving editor if the paper is transferred.</p>

<p>We look forward to your comments below.</p>]]>
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Sticky matters configuring a synapse </title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/nature_network_journal_club_neurexin.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4968" title="Nature Network Journal Club: Sticky matters configuring a synapse " />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4968</id>
    
    <published>2008-03-19T15:03:45Z</published>
    <updated>2008-03-20T22:29:17Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper explores the in vivo function of neurexins in the coordination of pre- and postsynaptic apposition using Drosophila. The contributor discussing this paper for the...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1223">live</a>. The <a href="http://www.neuron.org/content/article/abstract?uid=PIIS0896627307006137">paper</a> explores the in vivo function of neurexins in the coordination of pre- and postsynaptic apposition using <em>Drosophila</em>.</p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://network.nature.com/profile/U5EA433C3">Margaret Ho</a>, a postdoctoral fellow at the Institute of Molecular Biology, Academia Sinica Taiwan in the lab of <a href="http://www.imb.sinica.edu.tw/~ctchien/ ">Cheng-Ting Chien</a>. I want to thank Margaret for her participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Haihong Ye: Amazing changes in Chinese neuroscience over the past decade</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/haihong_ye_chinese_neuroscience.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4953" title="Haihong Ye: Amazing changes in Chinese neuroscience over the past decade" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4953</id>
    
    <published>2008-03-17T18:47:45Z</published>
    <updated>2008-03-18T16:15:55Z</updated>
    
    <summary>[This is the inaugural post for a new feature at Action Potential. Periodically, we will provide insights from a regional correspondent on the interesting news, changes, or issues particularly affecting neuroscience in a particular location. Today&apos;s post is from one...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--4-->Correspondents]]>" />
            <category term="<![CDATA[<!--4-->Science Policy]]>" />
            <category term="<![CDATA[<!--7-->Random Thoughts]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p><em>[This is the inaugural post for a new feature at Action Potential. Periodically, we will provide insights from a regional correspondent on the interesting news, changes, or issues particularly affecting neuroscience in a particular location. Today's post is from one of our Asian correspondents, Haihong Ye of the Institute for Biophysics in the Chinese Academy of Sciences. She reflects on the dramatic changes that have occurred within Chinese neuroscience during her decade-long absence from this now-flourishing community. We examined these issues in our <a href="http://www.nature.com/neuro/journal/v11/n1/full/nn0108-1.html">March editorial</a>, but now invite you to provide your opinion. - N.G.]</em></p>

<p>Over the past 10 years, especially the last five, the whole world has been amazed by the Chinese economy. To me, however, the improvement in biological science research in China is much more amazing. In the summer of 1998 I left Beijing and went to the US to pursue a Ph.D. in neuroscience. In 2007, after nine years of graduate study and post-doc training abroad, I came back to Beijing, seeking opportunities for further career development. What a difference some strong funding and visionary directives, not to mention a decade, can make.</p>]]>
        <![CDATA[<p>Ten years ago, many of my classmates, having majored in physiology or biophysics, wanted to join neuroscience labs for their graduate studies. At that time, the Chinese neuroscience community was small, with a few labs scattered in the institutes of the Chinese Academy of Sciences (CAS) and the major universities in Beijing and Shanghai. Most of the labs were restricted to electrophysiology, using very traditional animal models. The establishment of the Institute of Neuroscience (<a href="http://www.ion.ac.cn/">ION</a>) by the CAS in Shanghai in November of 1999 marked the beginning of a new era for Chinese neuroscience research. Led by Dr. Mu-Ming Poo, ION is devoted to basic research in all areas of neuroscience, including molecular, cellular and developmental neurobiology, systems and computational neuroscience, as well as cognitive and behavioral neuroscience. Currently there are nineteen labs in ION, with a goal of reaching a steady-state of 30 labs by 2010. In 2005, the State Key Laboratory of Brain and Cognitive Science was formally established in the Institute of Biophysics of the CAS (<a href="http://www.ibp.ac.cn/">IBP</a>). They formed a strong team by combining labs utilizing a variety of systems (fly genetics, electrophysiology, fMRI and psychological approaches) to study various topics, including perception, attention, emotion and consciousness. Because of the increasing number of neuroscience labs, many universities have established, or are making plans to set up, centers for neuroscience. Consistent with the expanding neuroscience community, the number and the quality of publications is also increasing exponentially. Ten years ago, graduate students in China struggled to publish papers in Chinese journals. Nowadays, they are publishing in top international journals, making jealous their college classmates studying abroad.</p>

<p>What’s the driving force behind these amazing achievements? I think it’s the convergence of (1) government investment, (2) a backflow of internationally-trained scientists and (3) efforts made by the international science press: </p>

<p>(1) The National Natural Science Foundation of China (NSFC) is a major funding agency for basic science research in China. The budget for the NSFC was 1.85 billion yuan in the FY 1998 and 1999 combined. This number has increased to ~ 6 billion yuan in FY 2008 alone (1.8 billion will go to biology-related research), an average 21% annual increase for the past ten years. A similar, or even greater increase, has happened in other funding agencies, such as the Ministry of Science and Technology. Since 2007, the central government has stressed the importance of science and technology for the continued growth of the Chinese economy. We expect that government funding will continue to rise for a while longer. </p>

<p>(2) Many Chinese scholars, who went abroad in the 1980s or earlier have now established themselves as successful international scientists. Some have reached a stage in their career where they want to do more for Chinese society. China can now provide them with genuine opportunities to play leading roles in shaping the future of Chinese basic research. Some of them (Mu-Ming Poo, Xiaodong Wang, Yi Rao, Yigong Shi, just to name a few) have become the directors of the various institutes, centers and departments in China, implementing the infrastructure of a modern research institute onto the “old” Chinese system. On the other hand, younger scientists, like me, after completing a PhD or post-doctoral training abroad, are attracted by the exciting job opportunities and improved living standards back home. </p>

<p>(3) Another driving force also comes from abroad. In the past few years, major scientific publication groups have started to operate in China. They make efforts to help Chinese scholars publish in English, and provide services to help institutions raise their profile and international awareness of their top research. </p>

<p>The Chinese neuroscience community, like all other basic research communities, is in a fast growing phase and thus still faces a lot of challenges. Despite the increase in government funding, the grant size is generally small. In FY 2008, an average free application grant from the NSFC is ~300,000 yuan for 3 years, only ~US$14,000 a year. Most of the big grants (>1 million yuan) go to only a few institutes and labs in Beijing and Shanghai, a major reason for why these two cities have dominated the neuroscience landscape. One of my friends is a professor in Xiangya Medical School in Hunan province, one of the top five medical schools in China. It’s difficult for her to get grants from the NSFC. These labs live on small grants from local sources, and address questions that are not that “sexy”, very much like the situation in Beijing 10 years ago. As a developing country with a GDP per capita of just over US$2000, and millions of people still struggling to make ends meet, it’s difficult for the Chinese government to match the research budgets of Japan, Europe or the US. To support a large, productive and creative basic research community, we need to think of better ways to attract funding from other sources, such as through international collaboration, interest from pharmaceutical companies, and perhaps even from private donations or philanthropy from the Chinese nouveau-riche. </p>

<p>Another serious challenge for China is still the continuous loss of scientific personnel to the developed world. Although I argued above that this trend is beginning to reverse, each year, many talented and bright blossoming scientists still go to the US or European countries for graduate school or post-doctoral training. Until recently, only a small fraction of these individuals eventually came back. Although there are reasons to be optomistic regarding the reversal, does China need to do more in order to keep them home (e.g. playijng a more active role), or wait for this initial trickle of brain-drain-reversal to continue and (hopefully) broaden? </p>

<p>We must continue to promote the successful policies that have brought us here, while simultaneously establishing new and innovative strategies to nurture future growth. Conducting ground-breaking research, work that is uniquely Chinese, will undoubtedly contribute to the growth of the economy and the well-being of the Chinese people. The future looks bright and it is an exciting time to be a Chinese neuroscientist.</p>]]>
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Drug craving and internal state</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/ng_nature_network_journal_club_insula.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4899" title="Nature Network Journal Club: Drug craving and internal state" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4899</id>
    
    <published>2008-03-11T20:59:31Z</published>
    <updated>2008-03-20T22:26:10Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper is on the role of insular cortex in drug craving and the behavioral signs of abstinence-related malaise. The contributor discussing this paper for the...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1180">live</a>. The <a href="http://www.sciencemag.org/cgi/content/full/318/5850/655">paper</a> is on the role of insular cortex in drug craving and the behavioral signs of abstinence-related malaise.</p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://sitemaker.umich.edu/ben.saunders/home">Ben Saunders</a>, a graduate student at the University of Michigan in the lab of <a href="http://sitemaker.umich.edu/terryrobinson/research_program">Terry Robinson</a>. I want to thank Ben for his participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Neuroscience and Web 2.0: Participation may vary</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/ng_neuroscience_and_web.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4865" title="Neuroscience and Web 2.0: Participation may vary" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4865</id>
    
    <published>2008-03-07T20:51:30Z</published>
    <updated>2008-03-08T06:52:03Z</updated>
    
    <summary>In the last couple of years, after the recent explosion in the number of resources where scientific discussions can take place rapidly and without boundaries (i.e., using the internet), one could easily have predicted that we were on the cusp...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--7-->Random Thoughts]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>In the last couple of years, after the recent explosion in the number of resources where scientific discussions can take place rapidly and without boundaries (i.e., using the internet), one could easily have predicted that we were on the cusp of a revolution; the way in which scientists communicated with each other regarding data was about to change forever. Although poster session chatter at your favorite scientific meeting was never going to be replaced, now researchers could interact, trade ideas and get feedback from anyone, anywhere, at any time. Sounds pretty good, right? Unfortunately, it doesn't seem like neuroscientists are taking advantage of these cool new offerings. I could extrapolate to biology in general, but for more simplicity (and other obvious reasons), let's stick to what we know best.</p>]]>
        <![CDATA[<p>I have been thinking about these issues for a long time, ever since I commented on the <a href="http://blogs.nature.com/nn/actionpotential/2007/06/dissemination_before_peer_revi_1.html">introduction of Nature Precedings</a> last June (which was my first post on this blog, for those of you keeping score). I was skeptical about the speed with which scientists would give up their unpublished data, and at 57 neuroscience papers currently in the archive, this was even a bit slower than I expected (but other subject areas are doing quite well, with Bioinformatics boasting 110 submissions, for example). Shortly thereafter, I <a href="http://blogs.nature.com/nn/actionpotential/2007/07/public_opinion_forums_in_resea_1.html">discussed commenting forums in general</a>, and felt again that although adoption may be slow, that this medium would eventually become fundamental to the scientific process and discussion. In my opinion, we have a long way to go before we reach that lofty prediction.</p>

<p>My hand was forced by two excellent and recent commentaries (<a href="http://www.cshblogs.org/cshprotocols/2008/02/14/why-web-20-is-failing-in-biology/">here</a> and <a href="http://jove-blog.blogspot.com/2008/02/science-participation.html">here</a>) that provide many of the theories for why scientists do not widely use these new technologies. I would like to focus mainly on the concept of commenting on papers and data, the style embraced by <a href="http://biology.plosjournals.org/perlserv/?request=read-response&past_days=360">PLoS</a>, <a href="http://www.plosone.org/static/commentGuidelines.action;jsessionid=59096A0E8A7F733E36908EA4B438933E">PLoS ONE</a>, <a href="http://images.neuron.org/images/EdImages/Neuron/neuroncomments_oct25.pdf">Neuron</a>, <a href="http://precedings.nature.com/">Nature Precedings</a>, and more recently, in the <a href="http://blogs.nature.com/nn/actionpotential/2008/01/online_journal_club.html">neuroscience journal club</a> started at <a href="http://network.nature.com/group/neuroscience">Nature Network</a>.</p>

<p>So why are neuroscientists not taking advantage of this seemingly golden opportunity to communicate with one another? Granted, some papers are comment magnets (e.g. <a href="http://medicine.plosjournals.org/perlserv/?request=read-response&doi=10.1371/journal.pmed.0050045">this</a> or <a href="http://biology.plosjournals.org/perlserv/?request=read-response&doi=10.1371/journal.pbio.0050107">this</a>, but consider the subject matter and/or implications). But most of the time, papers sit with a "Comments" link beside them that links to nothing. What about telling the author your alternative hypothesis? How about suggesting a future experiment? Why not simply ask a very innocuous question about which buffer worked best for the biochemistry experiments? I can't put actual numbers on it without some painstakingly-boring grunt work, but I spent quite a bit of time clicking on paper "Comments" links at all of these sites that offer such a luxury, and found very few random hits where any comments had been made. I've attended enough journal clubs to know that <em>somebody</em> always has an opinion about most papers, so where are those people now? This should be their critical dream-come-true!</p>

<p>For those few publications that did receive comments, it was even rarer for the authors to respond. I took the liberty of commenting on some papers at <em>Precedings</em> within the categories of environmental sciences or evolution, and on only 1 occasion out of 5 did I receive a response. So why do these authors even post their papers if they are not interested in feedback? It is an obvious question for pre-prints, but even for published work, researchers put their efforts out in the public domain to be scrutinized. The authors should then be obliged to answer such scrutiny if and when it does arise. Can you imagine the oddity of a speaker staring out into space without responding during a question-answer session at a meeting? Well, the cyber-equivalent was going on at most places that I looked.</p>

<p>As Anna Kushnir and David Crotty pointed out in their blog commentaries (see above links), one of the main reasons for a lack of initiating comments is the fear of placing one's name with a criticism. That criticism may be wrong, too abrasive, not well-written, and now it is associated with the submitting party for all of cyber-eternity (or at least until server failure). At a meeting, after asking a really stupid question, we have plausible deniability. Unless somebody was taping the session, there is no hard evidence revealing our misguided thoughts (saying to our friends: "Well, the speaker didn't understand my question and blah, blah, blah..."). Not the case with these forums. But even that can be circumvented. Although anonymous comments are not really allowed in these forums, what's to stop people from simply making up a name and providing a Gmail account address like "sciencegeek@gmail.com" to establish legitimacy for the servers (or moderators, for that matter) accepting the comments? Although I disagree with anonymous commenting, I understand that some prefer this incognito approach. But despite the ability to use this cover of darkness, we <em>still</em> haven't seen a massive adoption of commenting practices!! So perhaps the age-old beast, lack of time, again wins out and should take most of the credit. Although probably true, I find this to be a lame and sad excuse.</p>

<p>During graduate school, we are taught that we learn the most when we present our data to the community, whether it is at a conference or even at lab meeting. We can learn just as much, if not more, from participating in online forums to discuss data, hypotheses, and interpretations. I still firmly believe that commenting forums will indeed become fundamental to practicing and publishing neuroscience in the future, and not just a fad, as it currently looks. So I say to you, readers of Action Potential, let's not miss out on an excellent chance to be early-adopters, with neuroscientists taking the lead on internet-based dialogue and collaborative thought amongst the biological science disciplines. With so many branches of neuroscience having deep roots in physics, computational methodology, programming and bioinformatics (all fields that are seemingly well-stitched into the fabric of Web 2.0 technology), it is an opportunity that would be shameful to miss.</p>]]>
    </content>
</entry>
<entry>
    <title>Retraction reaction</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/03/retraction_reaction.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4850" title="Retraction reaction" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4850</id>
    
    <published>2008-03-06T15:54:44Z</published>
    <updated>2008-03-07T22:52:21Z</updated>
    
    <summary>Nobel prize-winning neuroscientist Linda Buck has retracted a 2001 Nature paper. In the retraction in this week&apos;s Nature, the authors report difficulty replicating the data and &apos;inconsistencies&apos; between the original data and figures and data printed in the paper. Buck...</summary>
    <author>
        <name>Debra Speert</name>
        
    </author>
            <category term="<![CDATA[<!--2-->Debra Speert]]>" />
            <category term="<![CDATA[<!--3-->Breaking News]]>" />
            <category term="<![CDATA[<!--5-->Scientific Publishing]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>Nobel prize-winning neuroscientist Linda Buck has retracted a <a href="http://dx.doi.org/10.1038/35102506">2001 <em>Nature</em> paper</a>. In the <a href="http://dx.doi.org/10.1038/nature06819">retraction</a> in this week's <em>Nature</em>, the authors report difficulty replicating the data and 'inconsistencies' between the original data and figures and data printed in the paper. Buck told <em>Nature</em> reporter <a href="http://dx.doi.org/10.1038/452013a">Heidi Ledford</a> that the figures and data in question were contributed by the first author, Zhihua Zou, who was unavailable for comment. </p>

<p>This is the highest profile retraction that I can recall in neuroscience, but so far, there has been little fallout. Perhaps that's because the original findings were notable only in the neuroscience community rather than in the general public. Regardless, it indicates that neuroscience and its well known labs are not immune from fraudulent data. Although I admire Buck's swift and direct action, it concerns me that the first author has been assigned the lion's share of the blame. This seems like a familiar refrain, and I find it troubling. </p>]]>
        
    </content>
</entry>
<entry>
    <title>Nature Network Journal Club: Crossing the threshold to consciousness</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/02/ng_nnjc_crossing_threshold.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4794" title="Nature Network Journal Club: Crossing the threshold to consciousness" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4794</id>
    
    <published>2008-02-28T18:29:29Z</published>
    <updated>2008-03-20T22:26:38Z</updated>
    
    <summary>The next installment of the Nature Network Neuroscience group journal club is now live. The paper is attempting to understand the neural mechanisms that distinguish between conscious and unconscious processing, and is from a collaborative group in Paris. The contributor...</summary>
    <author>
        <name>Noah Gray</name>
        
    </author>
            <category term="<![CDATA[<!--1-->Noah Gray]]>" />
            <category term="<![CDATA[<!--2-->Interesting Neuroscience]]>" />
            <category term="<![CDATA[<!--2-->Journal Clubs]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>The next installment of the Nature Network Neuroscience group journal club is now <a href="http://network.nature.com/forums/neuroscience/1124">live</a>. The <a href="http://biology.plosjournals.org/archive/1545-7885/5/10/pdf/10.1371_journal.pbio.0050260-S.pdf">paper</a> is attempting to understand the neural mechanisms that distinguish between conscious and unconscious processing, and is from a collaborative group in Paris.</p>

<p>The contributor discussing this paper for the neuroscience group is <a href="http://network.nature.com/profile/apj">Alfredo Pereira, Jr</a>, an adjunct professor at São Paulo State University. I want to thank Alfredo for his participation.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Anti antidepressants</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/nn/actionpotential/2008/02/anti_antidepressants.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=5/entry_id=4774" title="Anti antidepressants" />
    <id>tag:blogs.nature.com,2008:/nn/actionpotential//5.4774</id>
    
    <published>2008-02-26T16:14:40Z</published>
    <updated>2008-03-07T22:52:21Z</updated>
    
    <summary>By now, you&apos;ve likely read a shocking headline questioning the effectiveness of the latest generation of antidepressants. Kirsch et al. report that selective serotonin reuptake inhibitors (SSRIs) are only slightly more effective than placebos at reducing depression in a meta-analysis...</summary>
    <author>
        <name>Debra Speert</name>
        
    </author>
            <category term="<![CDATA[<!--2-->Debra Speert]]>" />
            <category term="<![CDATA[<!--3-->Breaking News]]>" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/nn/actionpotential/">
        <![CDATA[<p>By now, you've likely read a shocking headline questioning the effectiveness of the latest generation of antidepressants. <a href="http://dx.doi.org/10.1371/journal.pmed.0050045">Kirsch <em>et al.</em> </a> report that selective serotonin reuptake inhibitors (SSRIs) are only slightly more effective than placebos at reducing depression in a meta-analysis of US Food and Drug Administration (FDA) data. Are these data really worth all the fuss? </p>]]>
        <![CDATA[<p>As Nicola Jones points out in the <a href="http://blogs.nature.com/news/thegreatbeyond/2008/02/post_3.html">Great Beyond</a>, drug companies are not required to publish negative data. Suspicious that published data on SSRI effectiveness were biased, the authors obtained FDA data via the US Freedom of Information Act. Researchers use the Hamilton Rating Scale of Depression (HRSD) to rate depression severity. Antidepressant treatment should reduce depression scores. Placebos often also reduce HRSD scores. A meta-analysis of FDA data showed that most SSRIs significantly (in the scientific sense) reduced HRSD scores relative to placebo, but the relative reduction was less than the effective criterion established by the UK National Institute for Health and Clinical Excellence (NICE). Thus, by NICE criteria, SSRIs would not benefit most people (Note: I am unaware whether the FDA has a similar effectiveness criterion). </p>

<p>By NICE standards, does anyone benefit from SSRIs? The authors found that people with high HRSD scores (people with severe depression) showed SSRI-induced HRSD reductions that passed by NICE criteria, suggesting that SSRIs effectively combat severe depression. However, placebos were less effective at reducing HRSD scores in people with severe relative to mild depression, which may explain the relative increase in SSRI effectiveness, according to the authors. </p>

<p>I'm not a physician, nor am I a policy maker, so I can't comment on NICE's effectiveness criteria. However, based on this study, it is inaccurate scientifically to describe SSRIs as 'ineffective'. That does not suggest that I have feelings about whether they should or should not be prescribed. Are antidepressants overprescribed? Probably. Should people stop taking their SSRIs. NO! It is never safe to reduce, change or stop antidepressant treatment without the supervision of a physician. Perhaps, in the end, effectiveness is in the eye of the patient and his or her prescribing physician.</p>]]>
    </content>
</entry>

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