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    <title>The Sceptical Chymist</title>
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   <id>tag:blogs.nature.com,2008:/thescepticalchymist/16</id>
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    <updated>2008-05-09T10:30:06Z</updated>
    
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<entry>
    <title>Reactions - Arata Yajima </title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/reactions_arata_yajima.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5272" title="Reactions - Arata Yajima " />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5272</id>
    
    <published>2008-05-09T10:22:06Z</published>
    <updated>2008-05-09T10:30:06Z</updated>
    
    <summary>1. What made you want to be a chemist? When I was a junior high school student, I was charmed by the periodic table. I have never lost interest in it because of its beauty. I needed to understand the...</summary>
    <author>
        <name>Alison Stoddart</name>
        
    </author>
            <category term="Reactions" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p><em>1. What made you want to be a chemist?</em></p>

<p>When I was a junior high school student, I was charmed by the periodic table. I have never lost interest in it because of its beauty. I needed to understand the nature of all atoms. Now, there is a big Japanese poster of "A periodic table for a family" produced by the Japan Foundation of Public Communication on Science and Technology in my office, so I can always see it. </p>

<p><em>2. If you weren't a chemist and could do any other job, what would it be - and why?</em></p>

<p>A painter or a farmer. One of my grandfathers was a painter. He painted beautiful pictures of plants or animals on Japanese traditional cloth. My other grandfather was a rice farmer. He grew Koshihikari, the very popular and most expensive variety of rice in Japan. My family considered me to be the most likely successor in either event.</p>

<p><em>3. How can chemists best contribute to the world at large?</em></p>

<p>Education. People tend to keep chemistry at a distance. A product that originates from natural resources is highly thought of by people, in other words, they tend to be afraid of "a chemically synthesized compound". For example, vanilline extracted from vanilla beans and chemically synthesized vanilline are virtually the same compound, but they will choose the former even if it’s three hundred times more expensive than the synthetic one. It's crazy! I think the goal of chemists is to produce people who have high scientific or chemical literacy by using our chemical knowledge.</p>

<p><em>4. Which historical figure would you most like to have dinner with – and why?</em></p>

<p>Prof. Adolf Butenandt, Nobel Prize winner, and also the person to discover the first insect pheromone, bombykol. I am interested in bio-regulators such as insect or microbe pheromones and hormones. I would like to hear his private lecture about his historical work on the isolation of bombykol. </p>

<p><em>5. When was the last time you did an experiment in the lab - and what was it?</em></p>

<p>Yesterday. I am active in our lab. My teacher and master, Professor Kenji Mori (now 73 years old), is still active in his lab! So I can't retire. </p>

<p><em>6. If exiled on a desert island, what one book, and one CD would you take with you?</em></p>

<p>I like movies, especially Science Fiction movies. So, I would take the soundtrack of Star Wars and explore the island with the music in the background during the day. And I will go on reading Crime and Punishment by Fyodor Dostoevsky at night.</p>

<p><a href="http://www.nodai.ac.jp/fer/original/shigen/">Arata Yajima</a> is in the Department of Fermentation Science at the Tokyo University of Agriculture and works on the synthesis of natural products and biosynthetic intermediates interest at the interface of chemistry with biology particularly the microbe pheromones and rice phytoalexins.</p>]]>
        
    </content>
</entry>
<entry>
    <title>NChem Research Highlights: Hydrogels, viral mimics and helical foldamers</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/nchem_research_highlights_hydr.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5342" title="NChem Research Highlights: Hydrogels, viral mimics and helical foldamers" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5342</id>
    
    <published>2008-05-09T09:42:11Z</published>
    <updated>2008-05-09T10:35:02Z</updated>
    
    <summary>Another Friday, another batch of Research Highlights for you all to enjoy. Steve&apos;s is about a pretty clever hydrogel. Hydrogels are potential carriers for drugs, but how do you get them to release their cargo in the right place? Aptamers...</summary>
    <author>
        <name>Neil Withers</name>
        <uri>http://www.nature.com/nchem</uri>
    </author>
            <category term="NChem research highlights" />
            <category term="Neil Withers" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Another Friday, another batch of Research Highlights for you all to enjoy.</p>

<p>Steve's is about a pretty clever <a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.7.html">hydrogel</a>. Hydrogels are potential carriers for drugs, but how do you get them to release their cargo in the right place? Aptamers are the answer...</p>

<p>Gav has written about some <a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.8.html">work</a> by Richard Zare's group that looks at how viruses might 'break in' to cells. They used surface plasmon resonance to study a model virus attaching itself to a model cell.</p>

<p>And finally...oligoamide foldamers are strings of amides or amino acids that...well, fold up. A bit like proteins or DNA do. But if you can get them to fold AROUND something, you can use them to trap molecules. Jane tells us more about <a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.9.html">work</a> done to this end in France and China.</p>

<p>Hope you enjoy this crop - if you have any feedback or comments, please let us know!</p>

<p>Neil</p>

<p><br />
Neil Withers (Associate Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>JJ: Day 98, Service with a &apos;Simplified Molecular Input Line Entry Specification&apos;</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/jj_day_98_service_with_a_simpl.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5335" title="JJ: Day 98, Service with a 'Simplified Molecular Input Line Entry Specification'" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5335</id>
    
    <published>2008-05-08T11:13:29Z</published>
    <updated>2008-05-08T12:07:46Z</updated>
    
    <summary>Hi everyone, This week the Nature Chemistry team have been thinking about how we display our wonderful papers (when we finally open the doors and eventually publish a paper, anyway). We’d really like to see what everyone else thinks about...</summary>
    <author>
        <name>Neil Withers</name>
        <uri>http://www.nature.com/nchem</uri>
    </author>
            <category term="Journal journeys" />
            <category term="Neil Withers" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Hi everyone,</p>

<p>This week the <a href="http://www.nature.com/nchem/authors/about_eds/index.html"><em>Nature Chemistry</em> team</a> have been thinking about how we display our wonderful papers (when we finally open the doors and eventually publish a paper, anyway). </p>

<p>We’d really like to see what everyone else thinks about some of the things we discussed after looking at what other journals have to offer.</p>

<p>So, the things we’re interested in:</p>

<p>(1) HTML vs PDF: does anyone read the HTML articles? Do you read the PDF on-screen or print it out?</p>

<p>(2) Big vs little graphics: what does everyone else think about the tiny size of the graphics in <a href="http://pubs.acs.org/about.html">ACS</a> html articles?</p>

<p>(3) Tagging/’semantic web’: what do you think about the toys on the RSC’s <a href="http://www.rsc.org/Publishing/Journals/ProjectProspect/">Project Prospect</a>? What kind of things would you like to see tagged/linked to other content in <em>Nature Chemistry</em>? For instance, Steve would love to do something with <a href="http://en.wikipedia.org/wiki/List_of_reactions">named reactions</a>.</p>

<p>(4) 3D molecular structures: do these help your understanding of a paper?</p>

<p>(5) How useful to you are InChIs and SMILES?</p>

<p>(6) Forward linking: the <a href="http://www.rsc.org/Publishing/Journals/">RSC</a> and <a href="http://www.elsevier.com/">Elsevier</a>/<a href="http://www.sciencedirect.com/">Science Direct</a> offer this – do you use it? Would you use an RSS feed that alerted you to new citations of a particular paper.</p>

<p>(7) Would you actually comment on papers if there was a comments box at the end?</p>

<p>(8) We really like the <a href="http://www.biochemistry.org/">Biochemical Society’s</a> HTML article style (sample one <a href="http://www.biochemj.org/bj/ev/381/0329/bj3810329_ev.htm">here</a>) – do you?</p>

<p>If we could get a deluge of posts about this one, we’d be overjoyed! And this is your chance to voice your opinion on what a <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em> paper should look like.</p>

<p>Neil</p>

<p><br />
Neil Withers (Associate Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Chemiotics: Why should a (biological) protein have one shape?</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/chemiotics_why_should_a_biolog.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5326" title="Chemiotics: Why should a (biological) protein have one shape?" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5326</id>
    
    <published>2008-05-07T10:03:06Z</published>
    <updated>2008-05-07T10:28:50Z</updated>
    
    <summary>Posted on behalf of Retread Back in the 80s when artificial intelligence (AI) was going to make humans obsolete, LISP was the programming language of choice for AI. As a neurologist I was interested in intelligence in any form (machine...</summary>
    <author>
        <name>Stuart Cantrill</name>
        
    </author>
            <category term="Chemiotics" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p><em>Posted on behalf of Retread</em></p>

<p>Back in the 80s when artificial intelligence (AI) was going to make humans obsolete, <a href="http://en.wikipedia.org/wiki/Lisp_%28programming_language%29">LISP</a> was the programming language of choice for AI.  As a neurologist I was interested in intelligence in any form (machine or otherwise) so I tried to learn it. Most programs looked like gibberish. There was a great quote in a book "Let's Talk LISP" after a particularly convoluted piece of code — "Relax you, never understand anything, you just get used to it".</p>

<p>I think the same thing has happened with our understanding of biologically relevant proteins. We've just become used to the fact that biological proteins have a dominant shape. However, we also know that other polymers don't. DNA and RNA certainly don't have a single shape.  </p>

<p>So why do biologically meaningful proteins have one? Consider enzymes. The amino acid side chains comprising the active site are found all over the protein rather than next to each other in the sequence. <a href="http://en.wikipedia.org/wiki/Chymotrypsin">Chymotrypsin</a>, one of the best studied enzymes, has a catalytic triad made from histidine #57, aspartic acid #102 and serine #195. To function, they must be brought near to each other and held there fixed (and in the proper orientation to boot). The same holds for structural proteins that make up muscle and the cytoskeleton.  </p>

<p>Yet only 10 kcal/mole — 2 hydrogen bonds — is enough to denature them. Not much of an activation energy — not even close to a covalent bond. Once denatured, <a href="http://en.wikipedia.org/wiki/Christian_B._Anfinsen">Anfinsen</a> showed that ribonuclease found its way back to the original shape, implying that there were no other conformations of similarly low energy available to it.</p>

<p>It is remarkable that we only have 20,000 or so protein coding genes when you consider just how large possible protein space is. In this regard, proteins are like English words. There are very few of them when you calculate how many there could be. <a href="http://en.wikipedia.org/wiki/Sonnet_18">Sonnet #18</a> — "Shall I compare thee to a summer's day?" contains 114 words of which 17 are 7 or more letters long. The Oxford English dictionary contains 600,000 or so words of all lengths. There are 8 x 10^9 strings of 7 letters. Few of them have meaning.  </p>

<p>Words are a lot shorter than proteins. There are 8 times as many strings of 4 amino acids (20^4 = 160,000) than we have proteins. My guess is that this isn't an accident, because I doubt that most strings of amino acids have a dominant shape (e.g., biological meaning), and even if they did, they couldn't find it quickly enough (the Levinthal paradox again).  </p>

<p>How would you prove me wrong? Is the question even meaningful scientifically? I (of course) think it is quite meaningful in a philosophic sense, since it bears on just how probable or improbable life is. The next post will discuss some gedanken experiments which could settle the question (or show that it is unanswerable).<br />
</p>]]>
        
    </content>
</entry>
<entry>
    <title>NChem research highlights: Buckyballs, self-assembly and antitumour agents</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/nchem_research_highlights_buck.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5309" title="NChem research highlights: Buckyballs, self-assembly and antitumour agents" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5309</id>
    
    <published>2008-05-02T10:08:29Z</published>
    <updated>2008-05-02T10:25:49Z</updated>
    
    <summary>Happy Friday everyone, and welcome to this week&apos;s batch of research highlights. Fullerenes: Buckyballs act just like giant atoms, complete with s, p and d orbitals that are bound to the sphere&apos;s hollow centre Antitumour agents: Hiding a potent, but...</summary>
    <author>
        <name>Neil Withers</name>
        <uri>http://www.nature.com/nchem</uri>
    </author>
            <category term="NChem research highlights" />
            <category term="Neil Withers" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Happy Friday everyone, and welcome to this week's batch of research highlights.</p>

<p>Fullerenes:<br />
<a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.4.html">Buckyballs act just like giant atoms, complete with s, p and d orbitals that are bound to the sphere's hollow centre</a></p>

<p>Antitumour agents:<br />
<a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.5.html">Hiding a potent, but insoluble, anticancer drug inside a cage complex represents a new approach to the use of inorganic chemotherapeutics</a></p>

<p>Self-assembly:<br />
<a href="http://www.nature.com/nchem/reshigh/2008/0508/full/nchem.6.html">Discrete complexes comprising stacks of up to nine aromatic molecules can be assembled in one step from a few simple building blocks</a></p>

<p>As for last week, anyone can read the articles for free, but you need to sign up for a free account first.</p>

<p>Neil</p>

<p><br />
Neil Withers (Associate Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Reactions - Molly Shoichet</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/reactions_molly_shoichet.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5271" title="Reactions - Molly Shoichet" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5271</id>
    
    <published>2008-05-02T10:05:09Z</published>
    <updated>2008-05-02T10:15:07Z</updated>
    
    <summary>1. What made you want to be a chemist? I enjoyed chemistry in high school and continued to enjoy chemistry at MIT. When I made a polymer in an advanced organic chemistry lab, I was hooked and then pursued my...</summary>
    <author>
        <name>Alison Stoddart</name>
        
    </author>
            <category term="Reactions" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p><em>1. What made you want to be a chemist?</em></p>

<p>I enjoyed chemistry in high school and continued to enjoy chemistry at MIT. When I made a polymer in an advanced organic chemistry lab, I was hooked and then pursued my PhD in polymer science and engineering at UMass, Amherst.</p>

<p><em>2. If you weren’t a chemist and could do any other job, what would it be - and why?</em></p>

<p>After graduating from MIT, I was accepted to both graduate school and medical school. If I wasn't a chemist, I would probably have been a medical doctor (not sure what type though).</p>

<p><em>3. How can chemists best contribute to the world at large?</em></p>

<p>We can advance knowledge. We can take advantage of these advancements in knowledge to influence policy and create better products for the future.  I'm particularly interested in tissue engineering/regenerative medicine where we can design polymers for use in tissue regeneration and delivery of drugs/therapeutics.</p>

<p><em>4. Which historical figure would you most like to have dinner with - and why?</em></p>

<p>Both Ralph Waldo Emerson and Abraham Lincoln are revered in our family (our sons are named after them, in part) - they were both great thinkers and great leaders.  This would be an interesting experience.</p>

<p><em>5. When was the last time you did an experiment in the lab - and what was it?</em></p>

<p>When I was on sabbatical, I learned how to obtain primary neurons in Drs. Freda Miller and David Kaplan's labs - this was in 2003.  The initial "sabbatical" became the basis for a PhD project, which Laura Yu completed (4 years later).  I also recently did a demonstration for my son's grade one class last week (April 2008) on dissolving an egg shell in vinegar - but this probably doesn't count as an experiment!</p>

<p><em>6. If exiled on a desert island, what one book and one CD would you take with you?</em></p>

<p>I would take the book on "How to get off a desert island" and bring a solar-powered iPod.<br />
 <br />
<a href="http://www.ecf.utoronto.ca/~molly/">Molly Shoichet</a> is in the Department of Chemical Engineering and Applied Chemistry at the University of Toronto and works on tissue engineering strategies to promote regeneration after traumatic injury in the central nervous system and targeted delivery in cancer.<br />
</p>]]>
        
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</entry>
<entry>
    <title>Diamond studies...on diamond</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/diamond_studieson_diamond.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5303" title="Diamond studies...on diamond" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5303</id>
    
    <published>2008-05-01T15:54:21Z</published>
    <updated>2008-05-01T21:09:49Z</updated>
    
    <summary>We&apos;ve just received a press release letting us know that the Diamond Light Source (&apos;the UK&apos;s world-class synchrotron facility&apos;) has just had its first users on its new test beamline (B16 for all you big facility junkies out there!). This...</summary>
    <author>
        <name>Neil Withers</name>
        <uri>http://www.nature.com/nchem</uri>
    </author>
            <category term="Neil Withers" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>We've just received a press release letting us know that the <a href="http://www.diamond.ac.uk/">Diamond Light Source</a> ('the UK's world-class synchrotron facility') has just had its first users on its new test beamline (B16 for all you big facility junkies out there!). This is only the 8th of the 40 planned beamlines.</p>

<p>The lucky scientists are from <a href="http://www.rhul.ac.uk/">Royal Holloway</a>, University of London, and they're developing high-res XRD techniques to map crystal imperfections. <a href="http://www.ph.rhul.ac.uk/publicity/acc_staff.html">Moreton Moore</a> (who Google reveals is also a <a href="http://www.runnymede.gov.uk/portal/site/runnymede/menuitem.213b29b2f0b38f21a6c7e2109a9084a0/">Councillor</a> on Runymede Borough Council) has spent a large part of his career studying...diamonds. Not just a girl's best friend, industrial diamonds can contain tiny inclusions of metal that could cause failure. So being able to separate out the elements within the metal using the hard X-rays from Diamond could lead to better industrial diamonds.</p>

<p>The new test beamline's job is to allow researchers (academic and industrial) to test their optical components. Kawal Sawhney, Principal Beamline Scientist, said 'It enables us to push our capabilities and advance the technology that is available to users, without interrupting the schedule of the other beamlines, ultimately resulting in better, cutting-edge science.'</p>

<p>Having used the neutron source at <a href="http://www.isis.rl.ac.uk/">ISIS</a> (on GEM and HRPD) and the old synchrotron source at <a href="http://www.srs.ac.uk/srs/">Daresbury</a> (9.1) in my PhD, I tend to get a bit green-eyed over this sparkling new facility. Daresbury especially was a source of mild dread to us all, probably because of the prospect of running an experiment over 48 hours, in which you need to change the image plate every 20 minutes. This required two of us to stay up until 4am before the other two team members took over. The unfortunate thing is that the furnace broke at around 9am, thus slightly ruining everything. That's to say nothing of the rubber bands and sticky tape that seemed to be holding everything together – or the infamous canteen!</p>

<p>Neil</p>

<p><br />
Neil Withers (Associate Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>First impressions</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/05/first_impressions.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5299" title="First impressions" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5299</id>
    
    <published>2008-05-01T11:36:49Z</published>
    <updated>2008-05-01T12:04:20Z</updated>
    
    <summary>Hi everyone, I&apos;m Neil, one the new associate editors on Nature Chemistry, and this is my first post here at the Sceptical Chymist. The eagle-eyed chemistry publishing blog aficionados among you may just remember some of my posts over on...</summary>
    <author>
        <name>Neil Withers</name>
        <uri>http://www.nature.com/nchem</uri>
    </author>
            <category term="Neil Withers" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Hi everyone, I'm Neil, one the new associate editors on <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>, and this is my first post here at the Sceptical Chymist. The eagle-eyed chemistry publishing blog aficionados among you may just remember some of my posts over on the <a href="http://www.rsc.org/chemistryworld/"><em>Chemistry World</em></a> blog, about such crucial topics as <a href="http://prospect.rsc.org/blogs/cw/?p=791">t-shirts</a>, <a href="http://prospect.rsc.org/blogs/cw/?p=686">food</a> and even <a href="http://prospect.rsc.org/blogs/cw/?p=592">science</a>.  </p>

<p>Today’s topic is inspired by a rather sad story...I found out around Christmas time that my first ever science teacher at my <a href="http://www.wheatonaston.org.uk/">village</a> <a href="http://www.brewood.staffs.sch.uk/">middle school</a> recently died at a fairly young age of motor neurone disease. So this post is dedicated to the memory of Mr Challinor – Gareth, I believe.</p>

<p>I vividly remember some of his first lessons back when I was a 9 year old, 20 years ago. The school buildings were quite new (10 or so years old at the time), so the little lab was pretty well kitted out. But he really instilled in us the fact that science wasn't about Bunsen burners or any of the other complicated apparatus we were all seeing for the first time. A scientist's most important tools, he said, were his or her eyes, to observe what was happening.</p>

<p>One of the first experiments I remember him showing us was incredibly simple, but also incredibly powerful. He'd told us about atoms, and how burning material was essentially just adding oxygen to it. To prove that things do get heavier once you’ve burned them, he carefully weighed some magnesium foil in a crucible, then set fire to it. After the bright white flame died away, he re-weighed the crucible and guess what? The weight had indeed increased. </p>

<p>As well as teaching us about atoms and combustion, something else he did in that experiment also stands out. He got one of the class (Jamie Preece, since you asked) to watch over his shoulder as he did the weighing (we couldn’t all fit around the balance). This was just to show that he wasn’t making it all up, that we shouldn’t believe him 'just because he said so', but to show what he said had happened actually did. That's a pretty important first lesson in science for anyone, but especially a 9 year old: don’t just take someone's word for it, see for yourself.</p>

<p>So, if anyone else would like to share their first ever experiment with the world, please let us know in the comments below!</p>

<p>Neil</p>

<p><br />
Neil Withers (Associate Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)<br />
</p>]]>
        
    </content>
</entry>
<entry>
    <title>Birth of a legend?</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/birth_of_a_legend.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5295" title="Birth of a legend?" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5295</id>
    
    <published>2008-04-30T23:39:38Z</published>
    <updated>2008-05-01T00:10:09Z</updated>
    
    <summary>First of all, I hope you&apos;ll all excuse the somewhat overreaching title of this post - the coincidental timing of this and the previous post, however, seemed to merit some comparison. Second of all (and the point of this post):...</summary>
    <author>
        <name>Catherine Goodman</name>
        
    </author>
            <category term="Catherine Goodman" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>First of all, I hope you'll all excuse the somewhat overreaching title of this post - the coincidental timing of this and <a href="http://blogs.nature.com/thescepticalchymist/2008/04/death_of_a_legend_1.html">the previous post</a>, however, seemed to merit some comparison.</p>

<p>Second of all (and the point of this post): <a href="http://www8.nationalacademies.org/onpinews/newsitem.aspx?RecordID=04292008">The National Academy of Science has elected 72 new members and 18 foreign associates</a> (which is the maximum that can be elected in any given year, apparently), of which a pleasantly surprising number are chemists (such as <a href="http://www.che.caltech.edu/faculty/arnold_f/index.html">Frances Arnold</a>, <a href="http://www.stanford.edu/group/boxer/">Steven Boxer</a>, <a href="http://mit.edu/chemistry/buchwald/people/bio-slb.html">Steven Buchwald</a>, <a href="http://www.dillgroup.ucsf.edu/ken.htm">Ken Dill</a>, <a href="http://mgwww.mbi.ucla.edu/">Michael Grunstein</a>, <a href="http://www.chem.harvard.edu/groups/Jacobsen/">Eric Jacobsen</a>, and <a href="http://web.mit.edu/chemistry/www/faculty/swager.html">Tim Swager</a>). Go chemists! It is perhaps worth noting, however, that only a small number of these folks have mustaches (which bodes well for Ken Dill; to be explained later). </p>

<p>The <a href="http://www.nasonline.org/site/PageServer?pagename=ELECTION_pub_mainpage">NAS site</a> also tells us that 'election is considered one of the highest honors that can be accorded a scientist or engineer'. What do you guys think? Are you more impressed by someone who is in the <a href="http://www.hhmi.org/">HHMI</a>? Or someone who's won a <a href="http://portal.acs.org/portal/acs/corg/content?_nfpb=true&_pageLabel=PP_ARTICLEMAIN&node_id=1319&content_id=CTP_004495&use_sec=true&sec_url_var=region1">Cope Award</a>, the <a href="http://portal.acs.org/portal/acs/corg/content?_nfpb=true&_pageLabel=PP_ARTICLEMAIN&node_id=1319&content_id=CTP_004545&use_sec=true&sec_url_var=region1">Priestley Medal</a>, or the <a href="http://portal.acs.org/portal/acs/corg/content?_nfpb=true&_pageLabel=PP_ARTICLEMAIN&node_id=1319&content_id=CTP_004540&use_sec=true&sec_url_var=region1">Nakanishi Prize</a>? How do you think the <a href="http://www.kavliprize.no/">Kavli Prize</a> will stack up (to be awarded for the first time in May)? Do you think NAS membership (or, in fact, most of these awards) would be more or less impressive if the rationale for who was picked was more transparent? Or do you find that the people doing great work come to be well-known and well-respected regardless of these external trappings? </p>

<p>In any case, it's clear that chemists are doing some moving and shaking (and shaving) these days. Congratulations to the new NAS members.</p>

<p>Catherine (associate editor, <em><a href="http://www.nature.com/nchembio/index.html">Nature Chemical Biology</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Death of a legend</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/death_of_a_legend_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5291" title="Death of a legend" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5291</id>
    
    <published>2008-04-30T18:17:23Z</published>
    <updated>2008-04-30T18:25:46Z</updated>
    
    <summary>This is just a quick note to say that Albert Hofmann, the chemist who first discovered LSD, has died at the grand old age of 102. He was something of a legend among modern-day medicinal chemists, not least because he...</summary>
    <author>
        <name>amitchinson</name>
        
    </author>
            <category term="Andrew Mitchinson" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>This is just a quick note to say that Albert Hofmann, the chemist who first discovered <a href="http://en.wikipedia.org/wiki/LSD">LSD</a>, has died at the grand old age of 102. He was something of a legend among modern-day medicinal chemists, not least because he decided to test out his discovery on himself.</p>

<p>You can find a <a href="http://blogs.nature.com/news/thegreatbeyond/2008/04/rip_albert_hofmann.html">report on his life</a> on the <a href="http://blogs.nature.com/news/thegreatbeyond/"><em>Great Beyond</em></a> blog.</p>

<p>Andy</p>

<p><br />
Andrew Mitchinson (Associate Editor, <a href="http://www.nature.com/index.html"><em>Nature</em></a>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Sex and the chemist</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/sex_and_the_chemist_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5284" title="Sex and the chemist" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5284</id>
    
    <published>2008-04-29T17:32:27Z</published>
    <updated>2008-04-29T17:48:36Z</updated>
    
    <summary>What is it that chemists really have on the brain? To answer the question, try clicking on this link to a book review in the New York Times, and have a look at the molecular structure to see if anything...</summary>
    <author>
        <name>amitchinson</name>
        
    </author>
            <category term="Andrew Mitchinson" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>What is it that chemists really have on the brain? To answer the question, try clicking on <a href="http://www.nytimes.com/2008/03/30/books/review/Paul-t.html?ref=books">this link</a> to a book review in the <a href="http://www.nytimes.com/"><em>New York Times</em></a>, and have a look at the molecular structure to see if anything leaps out at you.</p>

<p>So what did you see? If you're anything like the chemist that wrote in to the <em>New York Times</em> to complain, you'll have spotted that some of the carbon atoms appear to have formed five bonds. Fair enough. But did you notice that the molecule is actually spelling out the word 'sex'?</p>

<p>Credit goes to the <em>Newsmakers</em> section of <a href="http://www.sciencemag.org/"><em>Science</em></a> for telling this story of a chemist who was prepared to admit that he missed the point. I have to say, I think I'd have missed the point of the graphic too...</p>

<p>Andy</p>

<p><br />
Andrew Mitchinson (Associate Editor, <em><a href="http://www.nature.com/index.html">Nature</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Reactions - Donald Tomalia</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/reactions_donald_tomalia.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5183" title="Reactions - Donald Tomalia" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5183</id>
    
    <published>2008-04-25T10:21:38Z</published>
    <updated>2008-04-25T10:30:06Z</updated>
    
    <summary>1. What made you want to be a chemist? My curiosity! Born with a strong dose of curiosity, I found early in life that this drive addicted me to chemistry. I found that no matter how many problems were solved,...</summary>
    <author>
        <name>Alison Stoddart</name>
        
    </author>
            <category term="Reactions" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p><em>1. What made you want to be a chemist?</em></p>

<p>My curiosity! Born with a strong dose of curiosity, I found early in life that this drive addicted me to chemistry. I found that no matter how many problems were solved, their solutions led to so many more new questions. That feature alone has made chemistry an insatiably exciting hobby, my “best friend”, and a lifetime career.<br />
 <br />
<em>2. If you weren’t a chemist and could do any other job, what would it be - and why?</em></p>

<p>Probably a landscape architect. Firstly, I enjoy performing physical work. Secondly, I intuitively enjoy thinking about the unique function, dynamics and possible benefits that architecture contributes to structure at the pico-, nano- and micro-scale level. I believe one should expect to find similar issues at the macroscopic level. Undoubtedly, that is why I enjoy horticulture/gardening so much as a hobby.<br />
 <br />
<em>3. How can chemists best contribute to the world at large?</em></p>

<p>Chemistry is so pervasive in life; the environment, our health, society and even our presence in the universe. As practitioners of such a ubiquitous discipline it is our responsibility to be certain that our efforts are positive and for the good of all these issues.<br />
 <br />
<em>4. Which historical figure would you most like to have dinner with - and why?</em></p>

<p>Undoubtedly, John Dalton, Manchester, England (1766- 1844). I have always admired his courage, vision and commitment that led to his “New System of Chemical Philosophy” (1808). His vision and efforts launched our traditional chemistry platform from which all chemists have enjoyed, enhanced and derived benefits.  I toast to Dalton on each of my birthdays since we share the same birthday (September 5), however, 172 years apart.<br />
 <br />
<em>5. When was the last time you did an experiment in the lab - and what was it?</em></p>

<p>I conducted a dendrimer synthesis and a photochemical experiment within the past six months. I was curiosity driven by why a particular nanoscale dendrimer we had synthesized exhibited extraordinary fluorescence properties yet possessed no traditional fluorescent chromophores. At this time, these fluorescent properties have been confirmed; however, I still do not have a complete answer as to why they exhibit fluorescence.<br />
 <br />
<em>6. If exiled on a desert island, what one book and one CD would you take with you?</em></p>

<p>My favorite book is <em>The Notebooks of Leonardo da Vinci</em>.  I never cease to be amazed by his extraordinary discipline, articulation and keen observations on all aspects of life. My favorite CD would contain all the compositions/works of Wolfgang Mozart. I always seem to find fresh inspirations, excitement, new ideas and fulfillment in the presence of his unique notes, scales, musical patterns and sounds.<br />
 <br />
<a href="http://www.dendrimercenter.org/index.html">Donald A. Tomalia</a> is Director of The National Dendrimer & Nanotechnology Center and Distinguished Research Scientist/Professor at Central Michigan University.  He is engaged in research with a focus on nanomaterial synthesis (<em>i.e.</em>, dendrimers, metal nanoclusters,<em> etc.</em>), their nano-stoichiometries, nano-sterics and the identification of nanoperiodic reactivity and assembly patterns associated with these well defined nanomaterials to produce higher complexity.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Nature Chemistry research highlights</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/nature_chemistry_research_high.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5260" title="Nature Chemistry research highlights" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5260</id>
    
    <published>2008-04-25T09:48:26Z</published>
    <updated>2008-05-02T10:41:25Z</updated>
    
    <summary>Each Friday, the Nature Chemistry website will be updated with three new research highlights about interesting work that has caught the attention of the editors, here is this week&apos;s line up: Heterogeneous catalysis: Scanning transmission electron tomography is used to...</summary>
    <author>
        <name>Stuart Cantrill</name>
        
    </author>
            <category term="NChem research highlights" />
            <category term="Stuart Cantrill" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Each Friday, the <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em> website will be updated with three new research highlights about interesting work that has caught the attention of the editors, here is this week's line up:</p>

<p>Heterogeneous catalysis: <br />
<a href="http://www.nature.com/nchem/reshigh/2008/0408/full/nchem.2008.1.html">Scanning transmission electron tomography is used to create 3D images of active sites in nanoscale catalysts</a></p>

<p>Surface chemistry: <br />
<a href="http://www.nature.com/nchem/reshigh/2008/0408/full/nchem.2008.2.html">Subsurface carbon and hydrogen have an important role in selective palladium-catalysed alkyne hydrogenation</a></p>

<p>Alkaloid biogenesis: <br />
<a href="http://www.nature.com/nchem/reshigh/2008/0408/full/nchem.2008.3.html">Indole alkaloids extracted from closely related fungi lead to questions about how their biochemical pathways have evolved</a></p>

<p>The highlights are free to access, but you need to have a (free) nature.com account.</p>

<p>Stuart</p>

<p><br />
Stuart Cantrill (Chief Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>Journal journeys: Day 84, Team Chemistry</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/journal_journeys_day_84_team_c.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5243" title="Journal journeys: Day 84, Team Chemistry" />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5243</id>
    
    <published>2008-04-24T11:32:56Z</published>
    <updated>2008-04-24T11:53:59Z</updated>
    
    <summary>Apologies for not posting in Journal journeys as much as I would have hoped - the one overwhelming feature of setting up a new journal is that it leaves very little time to blog... I did want to take 10...</summary>
    <author>
        <name>Stuart Cantrill</name>
        
    </author>
            <category term="Journal journeys" />
            <category term="Stuart Cantrill" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>Apologies for not posting in <a href="http://blogs.nature.com/thescepticalchymist/features/journal_journeys/">Journal journeys</a> as much as I would have hoped - the one overwhelming feature of setting up a new journal is that it leaves very little time to blog...</p>

<p>I did want to take 10 minutes, however, to let you know that <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em> now has an editorial team - although it's not complete just yet (<a href="http://www.nature.com/npg/forms/03_current_job.jsp?ref=NPG/LON/855">we're also looking for someone to be based in the Tokyo office</a>). Brief editor bios (and their stunning headshots) can be found <a href="http://www.nature.com/nchem/authors/about_eds/index.html">here</a> on the new <a href="http://www.nature.com/nchem"><em>Nature Chemistry</em> website</a>. Each editor will also write their own <a href="http://blogs.nature.com/thescepticalchymist/features/reactions/">Reactions</a> piece in the coming weeks, so that you'll get to know them a little better - and perhaps I'll even get around to writing one myself sometime soon.</p>

<p>As part of the new website, we'll also be publishing three new <a href="http://www.nature.com/nchem/archive/reshighlts_current_archive.html">research highlights</a> each Friday*, covering what we think are important papers appearing in the literature. These will be freely available on the <em>Nature Chemistry</em> website (although you may have to <a href="http://www.nature.com/register/">register for a nature.com account</a> to access them).</p>

<p>*The first batch go live - with the new website - on a Thursday, not a Friday, because as I have learned, never push a new product live on a Friday... it doesn't give you too much room for error before the weekend hits...</p>

<p>Stuart</p>

<p><br />
Stuart Cantrill (Chief Editor, <em><a href="http://www.nature.com/nchem">Nature Chemistry</a></em>)</p>]]>
        
    </content>
</entry>
<entry>
    <title>I&apos;d like to teach the world to do a perfect TLC...</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/thescepticalchymist/2008/04/id_like_to_teach_the_world_to.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=16/entry_id=5241" title="I'd like to teach the world to do a perfect TLC..." />
    <id>tag:blogs.nature.com,2008:/thescepticalchymist//16.5241</id>
    
    <published>2008-04-23T21:00:25Z</published>
    <updated>2008-04-23T21:18:50Z</updated>
    
    <summary>In case you weren&apos;t aware, today is &apos;World Laboratory Day&apos;. This website tells us that &quot;World Laboratory Day celebrates the place where great discoveries, inventions, and medical cures are born. It&apos;s also where mad scientists dwell.&quot; I was actually going...</summary>
    <author>
        <name>Catherine Goodman</name>
        
    </author>
            <category term="Catherine Goodman" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/thescepticalchymist/">
        <![CDATA[<p>In case you weren't aware, today is <a href="http://holidayinsights.com/moreholidays/April/worldlaboratoryday.htm">'World Laboratory Day'</a>. This website tells us that "World Laboratory Day celebrates the place where great discoveries, inventions, and medical cures are born. It's also where mad scientists dwell." I was actually going to go in a completely different direction upon hearing the name of the holiday - something more to do with celebrating your international collaborators, thanking that company 3,000 miles away for making the small molecule you want to do assays with, or sharing the candy that someone brought back from a recent conference overseas... I also have to take issue with the poor grammar of the sentence (gosh, I really have become a nerd!), which suggests to me that mad scientists dwell in World Laboratory Day, which seems a bit unusual (unless World Laboratory Day is frozen in time like <a href="http://en.wikipedia.org/wiki/Brigadoon">Brigadoon</a>, perhaps? Ok, enough randomness.).</p>

<p>Although a lot of screen time is given to mad scientists in movies, TV shows, and even the news (nothing says 'Watch the 11:00 news' like a scientist raving about time machines or cloning him/herself), I don't see a lot of true scientific content devoted to these beloved figures. For example, a friend of mine suggested there could be a journal just for research from mad scientists (plots to take over the world, new kinds of poisons, etc., which would have the side benefit of making it extremely easy to fight terrorism (by arresting all the corresponding authors)), but there could also be conference sessions or entire conferences devoted to '<a href="http://en.wikipedia.org/wiki/Frankenstein">Ways to create living matter using a corpse's brain</a>' or '<a href="http://en.wikipedia.org/wiki/Honey_I_shrunk_the_kids">How to accidentally change the size of your family members so that they get lost in your back yard and hilarity ensues</a>'. What about special grants programs for people working on <a href="http://en.wikipedia.org/wiki/Jurassic_park">cloning dinosaurs into frog eggs</a>, or <a href="http://en.wikipedia.org/wiki/Face/Off">switching faces back and forth</a>? Really, I think this is a whole section of the science community we've been ignoring for too long. Unfortunately, most of these ideas don't really tie in to chemistry very well... perhaps we chemists are just too normal for all that silliness?</p>

<p>Anyway, I'm off to see if I can find some nice European chocolate. Hooray for globalization!</p>

<p>Catherine (associate editor, <em><a href="http://www.nature.com/nchembio/index.html">Nature Chemical Biology</a></em>)</p>]]>
        
    </content>
</entry>

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