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May 23, 2006

Data Webs

Last week I went to an Oxford meeting of participants in a project called BioImageWeb. This brings together scientists, developers, librarians, publishers and others with the aim of making it much easier to reliably find scientific images online. It's still early days, but I think this initiative is already showing promise.

In the meantime, the leader of BioImageWeb, David Shotton, a bioinformatics researcher at the Department of Zoology in Oxford, is organising a meeting called 'Data Webs' at Imperial College, London on Wednesday 28 June. It will discuss general issues around how best to enable scientific data to be shared and reused across the web, particularly looking at Semantic Web- and Web 2.0-type approaches. There's a great speaker line-up, including my Nature colleague, Ben Lund, who will be speaking about Connotea.

More details of the meeting are available here (50K PDF).

May 22, 2006

Charles Armstrong visits Nature

Charles Armstrong, CEO of software startup Trampoline Systems, came to visit last week and delivered a talk to the company. I heard him at ETech and just loved the combination of social insight and technology. I knew my Nature colleagues would find it fascinating too, and we weren't disappointed. Here are my notes from his talk.

Background

Charles studied social and political science at the University of Cambridge, and while there got interested in ethnography. Key elements include qualitative descriptions and holistic approaches. Once upon a time he worked for an internet marketing firm in the building next door to Nature's current London office. He was struck by dysfunction of corporate information systems and had a hunch that natural communities were much better at distributing and processing information. So he decided to spend 12 months living in the Isles of Scilly on the island of St Agnes in order to study this.


St. Agnes

His emphasis was on informal observation, questioning and learning. Towards the end of the project he added a formal interview process. Supported by two external academics, Ray Jobling and Michael Young.

Isles of Scilly consist of 5 inhabited islands with 2000 inhabitants. St. Agnes is 2 x 1.5km in size with 80 people. Small-scale tourism is the main economy. There is also flower farming but it no longer makes money. It is a crofting community and the same land is typically worked by several generations of the same family. There are half a dozen tractors and one school for children aged 5-11. The mail arrives on a boat from the main island, St Mary's. The daily arrival of the freight boat is one of the main social rituals -- about 20% of the population turns out.

Information from outside also arrives on the boat from St Mary's. This may be relevant to only 5 people on the island but would make its way to them in short order without lots of other people being troubled with it. (Charles notes that these results are impressionistic and based on informal polls, not rigorous statistics.)

Information dissemination

From these observations, Charles derived some rules for information dissemination in the community:

  1. Groups have implicit authorisation parameters that govern how information is relayed.
  2. Groups play a function in pooling intelligence about who needs to know certain pieces of information.
  3. Groups themselves can be identified as targets for relaying information.
  4. Each person and group is identified with certain semantic "triggers" that activate relaying behaviour.
  5. The "further away" two people or groups are in a social network, the higher the threshold for relaying information between them.

These five mechanisms seemed to explain the efficient distribution of information. This is in contrast to large organisations, which are intrinsically hierarchical and less efficient in terms of reaching the people who need to know (and only those people). For example, 34% of business email turns out to be completely unnecessary. But informally the same mechanisms as St Agnes are working even in large organisations.

Previous strategies to overcome this problem include:

  • Collaborative scoring (e.g., digg and Slashdot). This doesn't work in a heterogeneous community.
  • Semantic sorting of unstructured data (e.g., Autonomy). This isn't responsive to individual relevance and interest, only to topics.

Sociomimetics

Could a better information system be created by mimicking the natural social behaviour of small communities?

Biomimetics is the closest parallel -- this looks to nature for the solution to a human problem. For example, Velcro is based on the observation that seeds stick to dog fur. Also, Airbus has developed a low-friction wing surface based on the scale structure of shark skin. Sir Joseph Paxton based his building designs on the weight-supporting structure of water lillies.

Charles suggests the term 'sociomimetics' to describe borrowing ideas from natural societies in order to influence the design of new technologies, especially information technologies.

Trampoline

Trampoline, the system that Charles's company has created, is a sociomimetic approach to information management. It uses the following steps to route information appropriately and automatically:

  • Index content
  • Find content matches
  • Determine authorisation
  • Evaluate social network
  • Examine recipient preferences
  • De-duplicate messages

Their current focus is on email, but the process is general. It brings large organisations closer to the efficiency seen in natural communities.

Their first product was launched in 2004 and is being used by 6,000 people. They are now working on an enterprise email management product to be used alongside (e.g.) MS Exchange Server. It looks at the message flow and uses the rules listed above to direct information to people who might be interested but otherwise wouldn't have seen it -- a kind of automated village gossip. It's programmed in Java and uses lots of open-source libraries. The UK Foreign Office is among their current customers.

He then demos a tool that visualises the natural communication maps within organisations. This information is a by-product of the system as it works out which information to route to whom. -- it looks to me like a kind of org chart for the 21st century.

He then looks at the routing of a particular email sent to the 'Lab' group at Trampoline Systems. By setting the threshold appropriately, it can be automatically routed to people outside that group with a high degree of interest and the right authorisation. The system also takes into account how people respond to emails. (Responses to an email are a 'vote' for it in a similar way that links are vote for a web page in Google PageRank.) This allows for people who are prolific in sending emails, but not similarly influential.

Q&A (partial notes)

Q: Privacy issues: Maybe not everyone wants to be formally recognised as a key node in the network (i.e., a gossip).
A: Yes, we don't release this info to all users. People can only see their own networks.

Q:: Scalability of natural community approach.
A: The limit for natural communities is about 400-500. In addition, the imposition of a formal structure has a damaging effect on info management.

Q: What next?
A: Focussed on email for at least the next six months, then will start to weave in other info.

May 19, 2006

Social Bookmarking for Scientists at XTech 2006

Yesterday I give a talk at the XTech 2006 conference.

The talk was based on a paper I wrote for the conference: "Social Bookmarking for Scientists - The Best of Both Worlds". The paper, together with the accompanying slides for the talk, gives an overview of how Connotea integrates existing academic publishing technologies with the new approaches of social bookmarking.

May 08, 2006

Neuroscience Gateway

Here's the latest launch from Web Publishing, the Neuroscience Gateway, a free online resource for neuroscientists. The idea is to publish and highlight neuroscience content from Nature and other journals, but also to act as a central hub for all neuroscience and genomics researchers. It follows in the footsteps of the Signaling Gateway and the Cell Migration Gateway, and is a collaboration with the Allen Institute for Brain Research, set up by the philanthropist Paul Allen.

And crucially it serves as a front end to the Allen Brain Atlas–a free resource which provides maps of the expression of 20,000 genes in the mouse brain with detailed gene expression data available at the cellular level. That's no small potatoes.

This is my first post to Nascent. Just to introduce, I'm Adam Rutherford, the editor for Web Publishing. I've been at Nature for ever, but have been on an extended leave for the last few months, initially making a TV program, and then on paternity leave for the birth of my daughter in April. I'm primarily responsible for podcasting here at Nature, and my interests include cricket and extended periods of sleep deprivation.

May 04, 2006

Connotea Developer Tools

We've just released NPG's first public web service for developers — the Connotea Web API.

Connotea is our web-based social bookmarking and reference management service. The release of the Web API now allows any developer to create an application or web site that interacts with Connotea's database of references and links.

For those of you who are programmers, we've also released some Perl and Ruby libraries to allow you to get started quickly.

If you want explore what's possible with the Web API in more depth, have a look at the documentation on the Connotea Community Pages, or get in touch with us on connotea@nature.com or via the connotea-code-devel mailing list.

May 02, 2006

Linda Stone visits Nature

Linda Stone, formerly of Apple and Microsoft (but not at the same time ;), and now of "continuous partial attention" fame, came to visit Nature's office in London last week and delivered a great talk about how we can use technology to feel more fulfilled and less overwhelmed. It contained some similar themes to her excellent ETech talk in March, but also some new stuff. Here are my rough notes to give a feel for what Linda spoke about.

Technology sets me free, but technology also enslaves me. Aikido thought says that the opposite of a profound truth is also a profound truth. The sweet spot of opportunity is where human desire meets technology. Presenting a framework for thinking how we use our attention.

Multitasking and continuous partial attention (CPA) are different. Multitasking is automatic: we get as many things done at the same time (e.g., listen and drive) to be more productive. But CPA is different. We want to scan for opportunity in order not to miss anything. This creates an artificial sense of constant crisis, which causes stress and becomes addictive. We have stretched our attention bandwidth to the limits because attention bandwidth does *not* grow like computing bandwidth. We have refined CPA to a high art in the last 20 years. This is neither good nor bad, but we can have too much of it.

A company's core values can remain constant, but their expression needs to evolve. The period 1965-1985 was all about ourselves and maximising opportunities to improve our productivity. Self-expression, productivity and creativity were valued above all else. But we took these to extremes that Christopher Lash described as leaving us narcissistic, lonely and yearning for connection. Now we have swung the other way: we are all about connecting and we trust collective intelligence more than individual intelligence. Entrepreneurialism evolved into collective models like eBay. Starbucks provides customers with always-on 'fuel' and wireless connectivity. To succeed means making the most of every connection and opportunity. For example, people boast of having 3,000 friends on Friendster and there are parties at which everyone talks on their cell phones; CNN packs the screen with a clutter of information.

Now people are starting to resist. A 23-year-old friend said recently that she quit every online social networking service in order to make time to have dinner with people. A CEO gave up his Blackberry to *increase* the barrier to contacting him and give himself more time to reflect. This made him harder to access but *more* accessible because he's able to pay attention. Some companies require employees to 'disarm' their 'weapons of mass communication' at the meeting-room door.

CPA leads to being overwhelmed and unfulfilled. 'Always on' does not respect our natural cycles and the fact that we need downtime to be productive and creative.

New rules of engagement for email can help: 'Silent consent' means that if you don't reply by the deadline you agree. If you're on the cc line then you should *not* respond. Delete email after 14 days. Embed email courtesy guidelines at the end of email messages (along with the legalese). Powerful tools like email need guidelines for use.

We are on the edge of a shift. We need to use human will and technology to provide protection from overload, more filtering and meaningful connections. Now we need to discern opportunity instead of scanning for it. The collective will appears to be moving from asking, "What do we have to gain?" to asking, "What do we have to lose?". The iPod is not just a music player but a shield from the rest of the world. We want to trust Google, politicians (oops! ;) and product vendors.

Employees want managers to help them discern opportunity instead of pushing them to pursue everything that comes their way. The iPod won by taking away everything extraneous. For how this can go wrong, see the spoof 'Microsoft version' of the iPod box.

Knowledge workers scan for opportunity. *Wisdom* workers *discern* opportunity. The new mantra is 'does this improve my quality of life'?

[A Q&A session followed during which I didn't make notes.]

"Nascent Web publishing efforts have their genesis in a burning need to say something, but their ultimate success comes from people wanting to listen, needing to hear each other’s voices, and answering in kind."
Rick Levine
The Cluetrain Manifesto

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