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    <title>Nascent</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/" />
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   <id>tag:blogs.nature.com,2008:/wp/nascent/6</id>
    <link rel="service.post" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6" title="Nascent" />
    <updated>2008-05-13T11:58:17Z</updated>
    <subtitle>Nature Publishing Group&apos;s blog on web technology and science</subtitle>
    <generator uri="http://www.sixapart.com/movabletype/">Movable Type 3.2</generator>
 
<entry>
    <title>Where are we, where are we now?</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/05/where_are_we_where_are_we_now.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5362" title="Where are we, where are we now?" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5362</id>
    
    <published>2008-05-13T11:33:41Z</published>
    <updated>2008-05-13T11:58:17Z</updated>
    
    <summary type="html"> When Jeff Jonas came in a few weeks ago to give a talk he stressed the importance of what - where - who - when questions for understanding what is going on within corporations. Science too is generally concerned...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<img alt="screen-capture-1.png" src="http://blogs.nature.com/wp/nascent/screen-capture-1.png" width="307" height="73" />

<p>
When Jeff Jonas <a href="http://blogs.nature.com/wp/nascent/2008/04/jeff_jonas_web_seminar_at_natu.html">came in a few weeks ago</a> to give a talk he stressed the
importance of what - where - who - when questions for understanding
what is going on within corporations. Science too is generally
concerned with figuring things out, and earlier this month Nature ran <a
href="http://www.nature.com/nature/journal/v453/n7191/full/453002a.html">an
editoral</a> pointing out that "Among the basic elements of scientific
record-keeping, too often the 'where?' gets neglected. Now advances in
satellite-positioning technology, online databases and geographical
information systems offer opportunities to make good that neglect", so
it was coincidentally very timely that in the same week we had Tom Coates and
Seth Fitzsimmons come in to talk to us about some of the work that they
have been doing at Brickhouse, the Yahoo! R&D incubator located in San
Francisco. They specifically came in to talk about <a
href="http://fireeagle.yahoo.net/">Fire Eagle</a>, a location
brokerage service, but before getting into the specifics of Fire Eagle
Tom talked a little about Brickhouse and some of the stuff that is
coming out of there.
</p>]]>
        <![CDATA[<p>
Innovation is important for every company if for no other reason than
the <a
href="http://www.indiana.edu/~curtweb/Research/Red_Queen%20hyp.html">"Red
Queen" hypothesis</a>, in which no evolution leads to extinction by
default. Finding a way to innovate and to feed new ideas into an
exiting company is a classic optimization problem, you want to cast
about your local space with a random sampling of ideas that will get
you out of your local minimum, but not spend all of your efforts
pursuing new ideas that won't settle down to anything. Many companies
have tried different methods, with Google's 20% rule being a notable
case in point.
</p>
<p>
One of the approaches that Yahoo! have taken is to set up a
semi-autonomous group with the feel and spirit of a start up. This is
Brickhouse and is located away from the main company in the heart of
San Francisco. Tom characterized it as an attempt to bring the great
ideas together with great people who could make these ideas come to
life. He pointed out that sometimes the people who come up with great
ideas are not in the best position to execute them and vice-versa.
</p>
<p>
Indeed some of the products that they have shipped, and are in the
process of shipping, are pretty impressive. This approach to innovation has led to
 <a href="http://live.yahoo.com/">Yahoo Live</a>, <a
href="http://pipes.yahoo.com/pipes/">Pipes</a>, <a
href="http://bravo.yahoo.com/blog/">Bravo Nation</a> and Fire Eagle.
You can get a list of <a href="http://next.yahoo.net/archives/category/projects">some other projects here</a>.
</p>
<p>
Fire Eagle is a location brokerage service. It helps you share your
location, and gives you a high degree of control over this information. 
It is easy to build on top of, and to use to make location based
services. The way the system works is that you tell Fire Eagle where
you are. You tell Fire Eagle who, or what, you want to share that
information with, and then Fire Eagle tells all of these people or
services where you are. By making an open framework for the service
it is easy for other people to create tools that plug into Fire Eagle
for both input and output. Instead of building a N^2
infrastructure where every interconnection in the communication
network has to worry about passing, parsing and verifying
location-based data, the Fire Eagle service takes care of this, and
reduces the complexity of allowing rich location aware services to
emerge.
</p>
<p>
So why would you want to have your location known to other parties?
The numbers of applications are only limited by the imagination of
developers. There are many cool social, scientific and commercial
things (I'm averse to using the term application in this context, as
what we are talking about are things that lie on top of a piece of
infrastructure, so they could be higher level pieces of
infrastructure, physical objects, tools, toys, or a combination of of all
of these) that could be created. Being able to see where at a
conference or in a city all of your friends are, finding the closest
available taxi or bus, sending your location back to a recorder in
real time while you are in the field collecting data, listening to
music that friends of yours listened to, on that spot, at some point
in the past, being alerted to papers or stories that are being
published about the region that you are visiting (Connotea supports <a
href="http://www.connotea.org/guide#geodata">geo
tagging</a>).
</p>
<p>
Tom said that three things informed their design decisions, creation
of a service that can manifest anywhere that the network touches, a
service that will play well with other services, and a service that
decouples the creation and use of data.
</p>
<p>
The problem that Fire Eagle solves is that getting data is pretty
hard, and the people who are good at getting the data often only have
an interest in a small number of use cases for the data. Other people
who have lot's of ideas of what to do with data like this can't
because they can't get the data.
</p>
<p>
This is where having a location broker comes in.
</p>
<p>
Although the service has only been in beta for a few weeks, there have already been a lot of applications and
tools integrated with it. Manually updating your location is going to
be a burden, so the obvious sensor that can connect your location to
Fire Eagle is your mobile phone, and already some mobile phone
applications have built in integration with Fire Eagle. These include
<a href="http://zonetag.research.yahoo.com/installation_summary.php">Zonetags</a>
and <a href="http://www.navizon.com/">Navizon</a>. Other services that
auto-update your location to Fire Eagle include <a
href="http://www.dopplr.com">Dopplr</a> , <a
href="http://plazes.com/home">Plazes</a> and <a
href="http://www.loki.com/">Loki</a>. Seth pointed out that this does
raise the question of whether one is then recording the position of a
person or of a device, but so many of the electronic trails that we leave (e.g. emails, blog posts, twitter updates) are only reflections of our existence, we are pretty used to thinking of them as sufficient representations of persons to the extent that fictionalized characters often now have blogs of their own in effect to deepen the illusion of their existence. One could easily expect to see a Fire Eagle update for some fictionalised persona at some point in the future.
</p>
<p>
Some services that consume your location include <a
href="http://brightkite.com/">Brightkite</a>, <a
href="http://www.lightpole.net/user/login">Lightpoe</a> and a <a
href="http://plugins.movabletype.org/fire-eagle-for-movable-type/">moveable
type plugin</a>.
</p>
<p>
Many of these other services are connecting to Fire Eagle using <a
href="http://oauth.net/">OAuth</a> and <a
href="http://wikinear.com/nearby/">Wikinear</a> is an example of an
OAuth + Fire Eagle + Google Maps + Wikipedia mashup that the prolific
Simion Wilson put together in about half a day.
</p>
<p>
The Fire Eagle guy's are currently working on "Friends on Fire", a
facebook app that will show you where you facebook friends are
(presumably so you can avoid the zombie horde).
</p>
<p>
That kind of wrapped up the talk and then there was a quick Q&A. (my
notes are a bit brief here, so I am only paraphrasing the questions
and answers)
</p>
<p>
Q: Timo: All the examples concentrate on the location of people, what
about the location of objects? in the scientific world we think of
buoys in the ocean transmitting geo data. <br />
A: Tom: We are thinking about that, but the next kind of things we
track will probably be pets. 
</p>
<p>
Q: Ian: Are there any concerns about privacy of data? <br />
(The bottom line to the answer is that the Fire Eagle guy's believe
that the data belongs to the user, and that every step and decision
made in development is focused on keeping the user in control of their
data and privacy, as an example Fire Eagle will stop following you if
you don't periodically grant your permission to it to do so) <br /> 
A: Tom: There is a code of conduct for the kinds of applications that
interface with Fire Eagle, like having to announce that they are
tracking people, and that they are sharing their data. If we see an
external app that is not playing by these rules we can turn it off.
<p>
Q: Matt Brown: are there are any good entries point sites for new
comers, and specifically London based? <br />
A: Tom: Fire Eagle is only 7 weeks old, wiki near was built in a half
day, there is an app gallery on the site,
</p>
<p>
Q: Timo: what is the advantage to Yahoo! to develop this yourselves,
why should yahoo bear the costs of setting something like this up? <br />
A:Seth: we have a really extensive database of palcenames, which makes
something like this possible. <br />
A: Tom: I'm a strong believer that a rising tide lifts all ships. <br />
A: Seth: if location based services become mainstream we also win. <br />
A: Tom: We try to work out what the future that is going to happen anyway is going to be like, and make it happen faster.
</p>
<p>
Q: Peter: You could liken this to paypal, is there a risk that you are
building a monopoly? <br />
A:Seth: anyone can implement our api so there is no chance of this being a monopoly, but we think our name db provides better value <br />
A:Tom: A good example are auction sites, bigger are better, but it doesn't make any sense to charge for Fire Eagle, there are open data sources in the world, someone could go and build another version of this, however people already trust yahoo with a lot of information. Yahoo is the biggest provider of email is the world
</p>
<p>
Q: Alf: what happens with people hammering the services, are you going
to be pushing updates, or will people always have to poll for data? <br />
A: Seth: we are thinking of building an xmpp interface.
</p>
<p>
And that was it for the talk. There is no question but that location is hugely important, and number of API's for 
map and location services is continuing to grow. Just before posting this write up Yahoo! launched a preview of the Yahoo! Internet Location Platform, and there is a good write up about that on <a href="http://radar.oreilly.com/archives/2008/05/yahoo-internet-location-platfo.html">O'Reilly Radar</a>.
</p>]]>
    </content>
</entry>
<entry>
    <title>Nature.com wins a Webby</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/05/naturecom_wins_a_webby_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5334" title="Nature.com wins a Webby" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5334</id>
    
    <published>2008-05-08T09:58:30Z</published>
    <updated>2008-05-08T11:01:58Z</updated>
    
    <summary type="html">As some of you may already have noticed, Nature.com has won a Webby. Yeah! :) Here are some more details. There are so many things that we still want to do with the site that it feels very much like...</summary>
    <author>
        <name>Timo Hannay</name>
        <uri>http://www.connotea.org/user/timo/tag/Timo%20Hannay</uri>
    </author>
            <category term="Publishing" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>As some of you may already have noticed, <a href="http://www.nature.com/">Nature.com</a> has won a <a href="http://www.webbyawards.com/webbys/current.php?season=12#webby_entry_science">Webby</a>.  Yeah! :)  <a href="http://www.nature.com/npg_/community/community_inawards.html">Here are some more details.</a></p>

<p>There are so many things that we still want to do with the site that it feels very much like a work in progress to those of us spending our days (and nights) on it.  But we're delighted that the judges already consider it useful and impressive.  And thanks also to David P for the kind namecheck on <a href="http://www.boingboing.net/2008/05/06/webby-awards-announc.html">BoingBoing</a>.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Science in the Streamosphere</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/05/science_in_the_streamosphere.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5331" title="Science in the Streamosphere" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5331</id>
    
    <published>2008-05-07T17:31:02Z</published>
    <updated>2008-05-08T11:35:23Z</updated>
    
    <summary type="html"> I was hoping to coin &apos;the streamosphere&apos; but it&apos;s already in Google. Neh. Anyway... The last month or two has seen many science 2.0 (for lack of a better term) bloggers pick up Twitter and FriendFeed. If you&apos;ve never...</summary>
    <author>
        <name>Euan Adie</name>
        
    </author>
            <category term="Social software" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<div style='text-align: center;'>
<img alt="Picture 8.png" src="http://blogs.nature.com/wp/nascent/Picture%208.png" width="500" height="319" />
</div>

<p>I was hoping to coin 'the streamosphere' but it's <a href='http://www.google.co.uk/search?hl=en&client=firefox-a&channel=s&rls=org.mozilla%3Aen-US%3Aofficial&hs=OQ7&q=the+streamosphere&btnG=Search&meta='>already in Google</a>. Neh. Anyway...</p>

<p>The last month or two has seen many science 2.0 (for lack of a better term) bloggers pick up Twitter and FriendFeed. </p>

<p>If you've never heard of the former then you probably shouldn't be reading Nascent. The latter is an <a href='http://blogs.nature.com/wp/nascent/2007/10/activity_aggregation.html'>activity aggregator</a>: you sign up, tell it which other services you use (del.icio.us? last.fm? blogs?) and it generates a page listing all of your public activity across those services like the Facebook mini-feed writ large. You can see feeds from your friends and attach short comments to their activity.</p>

<p>Services like these are less effort than blogging and you get more instant feedback in the form of little smiley faces from other users. The downside is that with everybody communicating in SMS-length 128 character bursts it can feel a little bit like one of those 'txt cafe' premium hotlines you see advertised on satellite TV late at night, albeit with fewer muscley bikers and bikini'ed hot-tubbers (Nature staff excepted).</p>

<p>If that description hasn't put you off too much it's worth dipping a toe into the activity stream. For the social networking aspect to work you really need a social network, so I've listed a couple of science bloggers below with links to their FriendFeed accounts. Not quite a blogroll... a twitlist? Maybe not. ;)  You can follow people without having them follow you, so don't be shy (but don't expect a follow   in return straight away):</p>

<ul>
<li> <a href='http://friendfeed.com/pansapiens'>Andrew Perry</a> - of Your Bones Got a Little Machine
<li> <a href='http://friendfeed.com/adw'>Andrew Walkingshaw</a> - of Brighten the Corners
<li> <a href='http://friendfeed.com/attilacsordas'>Attila Csordas</a> - of Pimm
<li> <a href='http://friendfeed.com/cameronneylon'>Cameron Neylon</a> - of Science in the Open
<li> <a href='http://friendfeed.com/mndoci'>Deepak Singh</a> - of BBGM
<li> <a href='http://friendfeed.com/jcbradley'>JC Bradley</a> - of Useful Chemistry 
<li> <a href='http://friendfeed.com/stajich'>Jason Stajich</a> - of Stajichlog
<li> <a href='http://friendfeed.com/themza'>Matt Wood</a> - of Green is Good
<li> <a href='http://friendfeed.com/michaelbarton'>Michael Barton</a> - of Bioinformatics Zen
<li> <a href='http://friendfeed.com/neilfws'>Neil Saunders</a> - of WYDIRD
<li> <a href='http://friendfeed.com/freesci'>Pawel Szczesny</a> - of Freelancing Science 
<li> <a href='http://friendfeed.com/pedrobeltrao'>Pedro Beltrao</a> - of Public Rambling
<li> <a href='http://friendfeed.com/rvidal'>Ricardo Vidal</a> - of My Biotech Life
</ul>

<p>See you there!</p>]]>
        
    </content>
</entry>
<entry>
    <title>50ft podcasting</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/05/50ft_podcasting.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5298" title="50ft podcasting" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5298</id>
    
    <published>2008-05-01T11:05:58Z</published>
    <updated>2008-05-01T11:32:39Z</updated>
    
    <summary type="html"> Nature put an awesome billboard Podcast advert up in the Gaslamp district of San Diego around the time of the FASEB and AACR conferences. Just in case you&apos;re wondering, the poster girl silhouette is that of Nature Reviews Neuroscience...</summary>
    <author>
        <name>Adam Rutherford</name>
        
    </author>
            <category term="Advertising" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p><img alt="Nature Billboard.bmp" src="http://blogs.nature.com/wp/nascent/Nature%20Billboard.bmp" width="448" height="336" /></p>

<p>Nature put an awesome billboard Podcast advert up in the <a href="http://maps.google.co.uk/maps?hl=en&q=Gaslamp,+San+Diego,+CA,+USA&um=1&ie=UTF-8&sa=X&oi=geocode_result&resnum=1&ct=title">Gaslamp</a> district of San Diego around the time of the <a href="http://www.faseb.org/">FASEB </a> and <a href="http://www.aacr.org/home/scientists/meetings--workshops/annual-meeting-2008.aspx">AACR</a> conferences. Just in case you're wondering, the poster girl silhouette is that of Nature Reviews Neuroscience editor <a href="http://www.nature.com/nrn/info/about_editors.html">Monica Hoyos Flight</a>.</p>]]>
        
    </content>
</entry>
<entry>
    <title>How to spend millions? The iPlant way.</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/how_to_spend_millions_the_ipla.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5262" title="How to spend millions? The iPlant way." />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5262</id>
    
    <published>2008-04-25T14:28:41Z</published>
    <updated>2008-04-25T15:07:49Z</updated>
    
    <summary type="html">At NPG, as at all forward thinking places, we have more ideas than we can follow through. For Governments funding heavy duty science informatics infrastructure, deciding which projects to support is an especially difficult task. There are various strategies funders...</summary>
    <author>
        <name>Matt Day</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>At NPG, as at all forward thinking places, we have more ideas than we can follow through. For Governments funding heavy duty science informatics infrastructure, deciding which projects to support is an especially difficult task. There are various strategies funders use to help them. I recently talked to Richard Jorgensen, director of the new <a href="http://iplantcollaborative.org/">iPlant Collaborative</a> about an interesting approach the <a href="http://www.nsf.gov/">NSF</a> is taking to formulate next-generation plant biology informatics infrastructure.</p>]]>
        <![CDATA[<p>The NSF has given $50M (for the first five years initially) to set up the iPlant Collaborative. Through workshops and other activities, the Collaborative aims to get the plant community to decide for itself the range of projects that would be most useful to the field. The outcome should be a set of Grand Challenges, from which new informatics projects will grow. The Collorative is an open rather than closed-shop exercise, and could therefore be interesting to sociologists who want real evidence about how scientists discuss big, no doubt contentious, issues.</p>

<p>I wonder what informatics programs will emerge?</p>]]>
    </content>
</entry>
<entry>
    <title>Display Your Connotea Bookmarks on your Site.</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/post_2.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5259" title="Display Your Connotea Bookmarks on your Site." />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5259</id>
    
    <published>2008-04-25T09:48:17Z</published>
    <updated>2008-04-25T10:04:58Z</updated>
    
    <summary type="html">We have developed a little piece of javascript so you can now show off your recent Connotea bookmarks on your site! You can check out how to do it here, and you can keep up to date with our updates...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>We have developed a little piece of javascript so you can now show off your recent Connotea bookmarks on your site! You can check out how to do it <a href="http://www.connotea.org/remote">here</a>, and you can keep up to date with our updates and new features on the <a href="http://www.connotea.org/blog">Connotea Blog</a>. Below is a screen shot, and you can see it live (but unstyled, cos I'm old skool like that) my own <a href="http://www.mulvany.net">homepage</a>.</p>

<p><img alt="screen-capture.png" src="http://blogs.nature.com/wp/nascent/connotea-links/screen-capture.png" width="355" height="429" /><br />
</p>]]>
        
    </content>
</entry>
<entry>
    <title>Science 2.0 on the Nature Podcast</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/science_20_on_the_nature_podca_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5247" title="Science 2.0 on the Nature Podcast" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5247</id>
    
    <published>2008-04-23T15:10:11Z</published>
    <updated>2008-04-24T10:56:45Z</updated>
    
    <summary type="html">The Nature Podcast for the week of the 17th April features an interview with Nature editor Mitch Waldrop about an article he has written for Nature&apos;s stablemate Scientific American, all about Science 2.0. Listen to the podcast here. The article...</summary>
    <author>
        <name>Kerri Smith</name>
        
    </author>
            <category term="Podcasting" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>The Nature Podcast for the week of the 17th April features an interview with Nature editor Mitch Waldrop about an article he has written for Nature's stablemate Scientific American, all about Science 2.0. </p>

<p>Listen to the podcast <a href="http://media.nature.com/download/nature/nature/podcast/v452/n7189/nature-2008-04-17.mp3">here</a>. </p>

<p>The article itself is a successful experiment in using Web 2.0 to its full - Mitch originally <a href="http://www.sciam.com/article.cfm?id=science-2-point-0-great-new-tool-or-great-risk">posted a draft</a> and invited readers to comment, before the final version was published the old-school way.<br />
 </p>]]>
        
    </content>
</entry>
<entry>
    <title>Barcamb2 announced</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/barcamb2_announced.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5202" title="Barcamb2 announced" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5202</id>
    
    <published>2008-04-17T14:38:23Z</published>
    <updated>2008-04-17T14:43:20Z</updated>
    
    <summary type="html"> Barcamb 2 has just been announced. This is a bar camp that is hosted by the Sanger institute in Cambridge with a focus on technologies related to science. Last year&apos;s was a blast, and you can read a writeup...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p><img alt="screen-capture-4.png" src="http://blogs.nature.com/wp/nascent/screen-capture-4.png" width="372" height="115" /></p>

<p>Barcamb 2 has just been announced. This is a bar camp that is hosted by the Sanger institute in Cambridge with a focus on technologies related to science. Last year's was a blast, and you can read a <a href="http://blogs.nature.com/wp/nascent/2007/08/barcamb_cambridge.html">writeup</a> of that event. </p>

<p>The organisers have set up a <a href="http://upcoming.yahoo.com/event/473579/">Meetup Page</a> where you can sign up for the meeting, and a <a href="http://barcamp.pbwiki.com/BarCamb-2">Barcamb Wiki</a> describing the event.</p>

<p>If you have a chance to make it you should definitely try to get along.</p>]]>
        
    </content>
</entry>
<entry>
    <title>What&apos;s in your nature.com?</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/whats_in_your_naturecom_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5167" title="What's in your nature.com?" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5167</id>
    
    <published>2008-04-14T17:23:37Z</published>
    <updated>2008-04-14T17:48:26Z</updated>
    
    <summary type="html">Inspired by that famous Bio-Rad ad, Scientists for Better PCR (more of which Jenny Rohn blogged about on Nature Network), some of us have launched the It&apos;s in my nature.com competition. It&apos;s in my nature.com is the latest incarnation of...</summary>
    <author>
        <name>Li Kim Lee</name>
        
    </author>
            <category term="Publishing" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>Inspired by that famous Bio-Rad ad, <a href="http://bio-rad.cnpg.com/lsca/videos/ScientistsForBetterPCR/">Scientists for Better PCR</a> (more of which Jenny Rohn <a href="http://network.nature.com/blogs/user/UE19877E8/2008/01/20/in-which-i-witness-the-dawn-of-a-new-advertising-era">blogged</a> about on Nature Network), some of us have launched the <strong><em>It's in my nature.com</em></strong> competition. <a href="http://www.facebook.com/group.php?gid=8274710679">It's in my nature.com</a> is the latest incarnation of the NPG group on Facebook, previously <a href="http://www.facebook.com/group.php?gid=2760145360">Nurture by Nature - Invaluable info for postgrad scientists and medics</a>. (<em>I</em> did not chose these names.)</p>

<p>Make a video summing up what "<em>It's in my nature.com</em>" means to you, be it: your love of science, your research, your scientific personality or even www.nature.com... funny, serious and/or creative submissions welcome. To enter, upload your video to the <strong><em>It’s in my nature.com </em></strong>group on Facebook. Then email one of the <strong><em>It's in my nature.com</em></strong> group admins your details (name, email address, link to your video and your Nature Network or Facebook profile). Your video files should be under 100 MB, shorter than 2 minutes (unless compellingly watchable), comply with Facebook video rules and submitted by midnight GMT 12 May 2008.</p>

<p>Competition entrants must be Nature Network registered users and/or members of <strong><em>It's in my nature.com</em></strong>. Employees of Nature Publishing Group, Macmillan or their families are not eligible. <strong><em>It's in my nature.com</em></strong> reserves the right to remove videos that are obscene, libellous/slanderous and/or judged to be offensive. <strong><em>It's in my nature.com </em></strong>accepts no responsibility for the content of the videos or accidents involved during production... we recommend using your low-tech mobile phone camera over the ethidium bromide stained 8 megapixel digital camera attached to the photographic hood in your lab. Rumour has it that the prize is a top-of-the-range Sony camcorder. Judges (<strong><em>It's in my nature.com </em></strong>group admins and other employees of Nature Publishing Group) will shortlist three video submissions, from which the winner will be voted for by the <strong><em>It's in my nature.com </em></strong>Facebook group.</p>

<p> </p>

<p> </p>

<p> </p>

<p> </p>

<p> <br />
</p>]]>
        
    </content>
</entry>
<entry>
    <title>Jeff Jonas Web Seminar at Nature</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/jeff_jonas_web_seminar_at_natu.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5159" title="Jeff Jonas Web Seminar at Nature" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5159</id>
    
    <published>2008-04-14T11:48:17Z</published>
    <updated>2008-04-14T14:15:58Z</updated>
    
    <summary type="html">On Friday the 4th of April Jeff Jonas came in to give the current latest installment of our Tech Talks. Jeff is the chief scientist for IBM&apos;s Entity Analytics, but that is just one data point out of what, during...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>On Friday the 4th of April <a href="http://jeffjonas.typepad.com/">Jeff Jonas</a> came in
to give the current latest installment of our Tech Talks. Jeff is the
chief scientist for IBM's Entity Analytics, but that is just one data
point out of what, during the course of Jeff's talk, became apparent was
a very rich context.</p>

<p>He managed to jam in about 90 slides in 45 minutes, so I'm mostly going
to paraphrase what he was saying in his presentation, as it went by so
quickly.
</p>

<p>As this is quite a long blog post I'll save you the trouble or reading
it by giving away the ending right now, the main theme that Jeff talked
about was data. Lot's of data, almost mind staggeringly huge volumes of
data, and how to deal with it all. The answer is to construct a system in
which each
of the nodes (or sensors) reporting information provides that information
in
a format
that can be stitched  together in a contextually aware way.
By stepping
away from extracting a signal from one piece of datum, and instead
building a way to look at the context in which that datum lives you can
solve interesting problems. That's kind of the big picture.</p>

<p> At the end of his talk he also entertained us with some of his thoughts
 on diverse topics, from the total surveillance state to how safe is the
 world really? The longer write up is below the break.
</p>]]>
        <![CDATA[<p>The longer version begins now. Jeff started out in the IT industry
through looking at questions relating to identifying people who were
trying to hide their identities. This was initially work for credit and
collection agencies who often deal with people falsifying
records for lots of different reasons. Though he didn't say so
explicitly, it was probably through solving these kinds of problems that
led to his very interesting take on dealing with data. This work soon
found interested clients in the casino's of Las Vegas.
</p>
<p>
Las Vegas is a place where there is quite an incentive to cheat, in that
a correctly worked scam can net a large profit for the perpetrators in a
very short space of time. He showed a video of a table where one of the
gamblers traded his deck with the dealer deck. These cards had been ordered
in such a
way that everyone at the table knew the ordering of the cards, enabling
them to play a deterministic game, and cheat the casino. It would
probably be prudent for these kinds of people to try to hide their
identities and also prudent for the casino to try to recognise such
people when they turn up at the casino's doorsteps.
</p>
<p>
He detailed the lengths that some criminal organisations go to in order
to introduce people who will cheat to the casinos in such a way that the
casino will have no prior information about these people. Quite a way is
the answer.
</p>
<p>
On the other hand there is a lot of data out there, and if you could
solve the puzzle by stitching the data together then you might be able
to stay one step ahead and intercept these scams before or during,
instead of finding out a lot later.
</p>
<p>
He devised a system called NORA (non-obvious relationship awareness) for
these clients to tackle just this problem, then in 1998 he was asked to
speak about this work at a public NSA-hosted conference. It was after this
that his company was
acquired by IBM.
</p>
<p>
He described a conversation with a counterterrorism intelligence analyst
where he asked her
what she could wish for. She said that she wished she could get answers
faster, to which Jeff replied, 'what are the chances that you can ask
every smart question every day?'. The point here is that sometimes a
question that is asked today needs to wait until some event happens in
the future before it can have a meaningful or relevant answer. You
probably can't ask that question every day, but if there was a way to
put that question into storage and allow it to become active when the
data that is required to give it relevance shows up, then this would be
a useful way of dealing with the question. In fact what you are doing is
treating the question like data. One of Jeff's key points is that you
have to allow the data to find the data and the relevance must find the
user. OK, so that might sound a bit cryptic, but the basic idea behind
it is pretty straightforward.
</p>
<p>
The current situation is that organisations have huge piles of data, but
that data tends to reside in separate relational silos, and these silos
don't talk to one another. Moreover a query against one of these silos
tends to only match exact terms, so if you are searching for 'Bill' and
you have perhaps millions of names in your data set you are not going to
get results for anyone called 'William', or 'Bil' or 'Billy', even
though as humans we know that semantically these forms are all related.
Aside from the lack of semantic reconciliation that exists within one
data set, different data sets rarely connect to one another. For
instance a database containing fraud investigations is rarely connected to
one’s own employee database. Jeff described this by saying that this
data is isolated and as a result our perceptions of the data is
isolated.
</p>
<p>
In order to solve a puzzle, such as determining connections between fraud
rings and insiders, you
need to give a context to your data so that you can begin to infer
relationships within the data. He described this as creating persistent
context.
</p>
<p>
OK, so what is the pseudo-algorithm for dealing with all of this
messiness?
</p>
<p>
Lets take as an example a record for renting an apartment. This might
contain a name, address, date of birth, and perhaps a phone number. Let's
say that
the name is 'Bill Weather'. Now let's take a record in the apartment’s
eviction database.
Again this may contain a name, date of birth, and address.
Perhaps the name in this case is 'William Weather', but the address is
the same as in the first case. Tying these together tells us that
anytime we encounter 'William Weather' or 'Billy Weather' at this address
in
the future,
we are probably dealing with the same person, through the glue of the
same address. In order to create a data engine that can do this kind of
matching you have to extract key features (names, addresses, phones, etc.)
from all of your sources into one
store where semantic reconciliation is attempted on each new record in real
time.
These key features generally represent 'who', 'what', 'where' and 'when' as
available on each individual observation (e.g., atomic level of data).
</p>
<p>
You accumulate and store. You can also do the same for questions. A
question might be structured as 'did this person buy anything in our
store'. If you have no record of that person right now, instead of
throwing away the question add it to the data store, in it's atomic
form, and if any record for that person comes along you already have
some indication that there is something interesting about this person.
In effect you are getting rid of the distinction between questions and
data, and replacing them by relationships, or contexts, about entities.
After all, questions also usually concern people, places, times or
events.
</p>
<p>
You won't know whether a piece of data is important until someone asks,
but by melding everything together you build up persistent contexts.
</p>
<p>
Jeff compared this method to one of mining huge amounts of latent data,
which he described as trying to boil the ocean. The flip side of Jeff's
approach is that not only do you treat queries as data, but data then
also become queries, as a new datum can tie together pieces in your
puzzle and trigger a reconciliation of information which leads to
insight about the data set. The trick is to take the approach of
contextualising each datum as it arrives. This is the most efficient way
to deal with data. By processing upon receipt you can begin to scale
with new information. You don't have to go back periodically and try to
mine
through
the ocean. This reminded me of a comment about fixing bugs in computer
code. The most efficient place to fix a bug in computer code is just
after you have typed it. Any delay past this point adds to the cost of
fixing the bug.
</p>
<p>
He cited the example of a US federal agency who probably have
multi-zetobytes of data lying
around the place. There are not enough computers on Earth to sift through all of
this data via brute-force, and this is a problem that is getting worse as
our capacity as a species to leave digital trials increases.
</p>
<p>
Another emergent aspect of this system is that queries find queries, and
give a deeper picture about the information that you are dealing with.
What you are doing is constructing context in an ongoing way, and when
that context reaches a relevance threshold level you can publish insight.
</p>
<p>
Jeff said that bad data was good for solving problems like this because
it helps to spread out the interaction of pieces of the puzzle. He said
that if you polish all of your data you end up loosing essential
features of the data. So how do you treat ambiguities and false
positives in the data? The answer seems to be to throw more data at the
problem, and in the process of reconciling bits together you
get rid of the ambiguities. He also said that orthogonal data sets were
very important for gluing disparate data together.
</p>
<p>
He gave an example of where he was asked to find invented identities in
a population. The given number of total individuals was known. Data from
a variety of sources was ingested into the system, and each time a new
name, or set of information regarding a person, was encountered a
potential identity was created in the system. As data was poured in the
number of possible people in the population at first grew to a multiple of
the actual figure, before data reconciliation occurred and the potential
numbers of individuals rapidly dropped down towards the real figure,
with identifications of false identities popping out on the way down.
</p>
<p>
Now, of course, these tools work where there is a lot of information
about people, and indeed Jeff was talking about use cases in situations
where the population of an entire country was being queried, which
obviously raises questions about data, privacy and surveillance. As he
was talking I was wondering about the issue of false positives, and the
example of passenger no fly lists came to my mind, but then I realised
that the example of the <a
href="http://www.cbsnews.com/stories/2006/10/05/60minutes/main2066624.shtml
"
>TSA
no fly lists</a> was a perfect example of not using the techniques that
Jeff was describing for doing reconciliation of knowledge about people
based on multiple silos of data.
</p>
<p>
In fact Jeff addressed questions of privacy directly in two ways. In the
first case he asked how do you go about reconciling information in two
data silos where you might not want to share all the information between
both of the stores of data. He said that this was a big problem for
government agencies where there are very strict regulations about data
sharing between departments, so that one group looking at terrorist
activity may not be able to access the database of a group looking at
drug smuggling. To overcome this Jeff suggested that it is
possible to share one-way hashed representations of portions of the data
between data stores. The hashed representation is a unique
non-reversible representation of a piece of information. If you give me
one of these hashes there is nothing that I can do to reverse the
transformation and extract the original information, but if you tell me
the algorithm you used to create the one way hash, I can apply that
algorithm to my data and see if any of my data produces the same hash
that you gave me. If it does then I know that you have some information
about something that I also have information about and it might be worth
looking at cooperating on this particular item.
</p>
<p>
He stressed that this technique does not do away with proper policy
controls on how you manage access to your data, but rather what it can
do is simplify the conversation you might want to have about looking
into sharing information between different agents.
</p>
<p>
That was pretty much most of what Jeff talked about during his main
talk, then he started telling us about stuff that he had been thinking
about. One of these things, unsurprisingly, is the emergence of the
total surveillance society. His opinion is that this is both
irresistible and inevitable and that it is being driven by consumer
forces. The fact that people love GPS on their phones is just the start
of what will be a series of technologies that will make total
surveillance a reality. His other example was the idea of a pair of
glasses that have an embedded RFID chip. The convenience of not being able
to loose such items owing to their constant traceability will make
people buy items like this simply due to our tendency to try to optimise
our lives, and a consequence of this pursuit will be an in effect a the
creation of a surveillance infrastructure.
</p>
<p>
Virtual worlds also came up, and Jeff said that he expects a significant
amount of time to be spent in virtual worlds, and that we will be drawn
into them through our need to conduct business there. He said that at
the moment he finds them kind of boring, but indicators that they will
be important are that they provide an immersive experience, the 100
dollar laptop is becoming a reality, and for billions of people the
experience of life that is represented in virtual worlds is
significantly more appealing than the circumstances that they are faced
with in their day to day lives. If you have a business model where the
very poor can gain access to a virtual world for a micro payment of a
few cents a month, and you add this to a potential market of a couple of
billion people, then you have a viable, indeed a compelling, business.
</p>
<p>
The last thing that Jeff talked about was how safe the world is. He
pointed out two opposite trends here. The first is that at the moment
the world is safer than it has ever been before. That the current
average life expectancy world wide is 67, which is higher than at any
point in the history of the world. He compared mortality rates in the
13th century from the black death to the kinds of threats that tend to
be broadcast across the media today. The black death killed 17% of the
population of the world. Jeff pointed out that even if you took the US
and Europe and dropped them into the sea you would only manage to get
rid of 5.5% of the population of the earth, and so the kinds of threats
that we worry over from terrorist activities today are incredibly minor
within a historic perspective, and that the reality is that there has
been no better time to be alive.
</p>
<p>
In contrast the cost of manufacturing tools for killing lots of people
have been dropping as our technology advances. The cost of the first
nuclear weapon was a significant % of US GDP, but now we can manufacture
potentially lethal virus strains that could be more damaging, and at a
fraction of the cost. He called this section more death, faster,
cheaper.
</p>
<p>
All in all, Jeff raised a lot of thinking points. At the end we had a
chance to ask him a few questions. He said that the kind of work he is
involved with is not just applicable to casinos and to government
agencies, but to all manner of businesses. When asked how we might apply
these ideas at Nature he advised that we ask ourselves what we do and
what we are good at and then try to map these things onto the kinds of
atomic questions that can be used for gluing lots of data together.
</p>
<p>
The issue of using these ideas in science seems to have some
applicability, for instance using the one way hash idea to see if
different labs are working on the same genes, or chemicals, without
saying directly what those specific entities are, however it's not clear
whether science could deal with the cost issue involved in doing this.
</p>

<p>Jeff writes prolifically on his blog about his ideas and he suggested the following posts as further reading regarding the topics that he touched on in his talk

<ul>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/04/to_know_semanti.html">To Know Semantic Reconciliation is to Love Semantic Reconciliation </a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/03/more_data_is_be.html">More Data is Better, Proceed With Caution</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/05/ubiquitous_sens.html">Ubiquitous Sensors? You Have Seen Nothing yet</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/08/accumulating_co.html">Accumulating Context: Now or Never</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2008/02/virtual-reality.html">Virtual Reality: There Is No Place Like Home</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/07/how-to-use-a-gl.html">How to Use a Glue Gun to Catch a Liar</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/12/it_turns_out_bo.html">It Turns Out Both Bad Data and a Teaspoon of Dirt May Be Good For You</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/06/why-faster-syst.html">Why Faster Systems Can Make Organizations Dumber Faster</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/06/you_wont_have_t.html">You Won't Have to Ask -- The Data Will Find Data and Relevance Will Find the User</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/02/to_anonymize_or.html">To Anonymize or Not to Anonymize, That is the Question</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2006/05/what_came_first.html">What Came First, the Query or the Data?</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/09/more-death-chea.html">More Death Cheaper in Future</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/07/the-world-is-no.html">The World is Not a More Dangerous Place</a></li>
<li><a href="http://jeffjonas.typepad.com/jeff_jonas/2007/10/six-ticks-till-.html">Six Ticks till Midnight: One Plausible Journey from Here to a Total Surveillance Society</a></li>
</ul>
</p>
]]>
    </content>
</entry>
<entry>
    <title>Blogging in the Lab, ChemTools</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/blogging_in_the_lab_chemtools.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5147" title="Blogging in the Lab, ChemTools" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5147</id>
    
    <published>2008-04-11T17:22:54Z</published>
    <updated>2008-04-11T17:46:12Z</updated>
    
    <summary type="html">One of the talks at last weeks conference on Open Repositories in Southampton talked about introducing blogging into the lab and the challenges and opportunities that this provided. The talk was given by Simon Coles and he pointed out ChemTools,...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>One of the talks at last weeks conference on Open Repositories in Southampton talked about introducing blogging into the lab and the challenges and opportunities that this provided. The talk was given by Simon Coles and he pointed out <a href="http://chemtools.chem.soton.ac.uk/projects/blog/">ChemTools</a>, where the Southampton chemistry department is experimenting with using blogs as a tool for sharing information about their experiments. Many of the blogs are private, but <a href="http://chemtools.chem.soton.ac.uk/projects/blog/blogs.php/blog_id/13">some</a> are open and show that Blags can also drive discussion directly related to experiments. Apart from just hosting inter-lab discussions, Simon mentioned in his talk that some investigators use the Blog format to keep up a conversation with their students while working at a distance from them. </p>]]>
        
    </content>
</entry>
<entry>
    <title>Nature Network pub nights-coming to your town?</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/nature_network_pub_nightscomin.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5139" title="Nature Network pub nights-coming to your town?" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5139</id>
    
    <published>2008-04-10T21:01:17Z</published>
    <updated>2008-04-10T21:12:35Z</updated>
    
    <summary type="html">Over at Nature Network, we have been organizing monthly pub nights for scientists in Boston and London...casual get-togethers for people to meet and chat over drinks. This week, we at NN were really excited to see for the first time...</summary>
    <author>
        <name>Corie Lok</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>Over at Nature Network, we have been organizing monthly pub nights for scientists in <a href="http://network.nature.com/boston/group/GC780E744">Boston </a>and <a href="http://network.nature.com/london/group/nnlevents">London</a>...casual get-togethers for people to meet and chat over drinks.</p>

<p>This week, we at NN were really excited to see for the first time the Nature Network pub night being franchised in other cities. Way to go! On Tuesday, scientists in <a href="http://network.nature.com/group/berlin">Berlin </a>gathered and on Wed, scientists in <a href="http://network.nature.com/group/nyc">NYC </a>got together. You can read the reports from their events <a href="http://network.nature.com/forums/berlin/1332">here </a> and <a href="http://network.nature.com/forums/nyc/1349">here</a>.</p>

<p>So I would encourage any of you in other cities that are hotbeds of science to organize your own networking events for scientists. It's easy. Just <a href="http://network.nature.com/groups">set up a group</a> on <a href="http://network.nature.com">Nature Network</a>, invite your friends to join it, get them to invite their friends, pick a date, time, and place and away you go. Let the editors know too (network at nature.com) so that we can help you promote the event. We'll also send you cool NN swag to give away.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Nature.com nominated for a Webby</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/naturecom_nominated_for_a_webb_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5132" title="Nature.com nominated for a Webby" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5132</id>
    
    <published>2008-04-10T09:57:45Z</published>
    <updated>2008-04-10T10:18:35Z</updated>
    
    <summary type="html">Title says it all really. This is a great boon for us, sort of the equivalent of the Best Foreign Language Film Oscar, so kudos to anyone and everyone at Nature.com who has helped us to achieve this recognition. It&apos;s...</summary>
    <author>
        <name>Adam Rutherford</name>
        
    </author>
            <category term="Science" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>Title says it all really. This is a great boon for us, sort of the equivalent of the Best Foreign Language Film Oscar, so kudos to anyone and everyone at <a href="http://www.nature.com">Nature.com</a> who has helped us to achieve this recognition. It's a popular vote, so <a href="http://pv.webbyawards.com/ballot/home/1">VOTE NOW</a>! You have to register first though.<br />
The awards are announced on the 6th May, and we're up against <a href="http://www.jpl.nasa.gov">two</a> <a href="http://earthobservatory.nasa.gov">Nasa</a> sites, <a href="http://www.amnh.org/water">Water: H20 = Life</a>, and a site from the <a href="http://www.exploratorium.edu/imaging_station/">Exploratorium</a>. It tells you how the voting is going, we're currently third so <a href="http://pv.webbyawards.com/ballot/home/1">VOTE NOW</a>! </p>]]>
        
    </content>
</entry>
<entry>
    <title>DRM-free ebook of Clive James&apos;s Cultural Amnesia</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/drmfree_ebook_of_clive_jamess_1.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5112" title="DRM-free ebook of Clive James's Cultural Amnesia" />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5112</id>
    
    <published>2008-04-07T23:31:18Z</published>
    <updated>2008-04-07T23:39:09Z</updated>
    
    <summary type="html">My colleague, James Long, writes on The Digitalist: In parallel with the publication of the paperback, Clive James’s ‘intellectual autobiography’, Cultural Amnesia, is also being published as the first in our series of ‘special edition’ eBooks, featuring extra material not...</summary>
    <author>
        <name>Timo Hannay</name>
        <uri>http://www.connotea.org/user/timo/tag/Timo%20Hannay</uri>
    </author>
            <category term="Publishing" />
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p>My colleague, James Long, writes on <a href="http://thedigitalist.net/?p=124">The Digitalist</a>:</p>

<blockquote><i>In parallel with the publication of the paperback, Clive James’s ‘intellectual autobiography’, Cultural Amnesia, is also being published as the first in our series of ‘special edition’ eBooks, featuring extra material not available in the print version and including a specially written foreword by Clive James.

<p>We’re offering this eBook DRM-free; this is a deliberate choice on the part of both Pan Macmillan and Clive James. What we hope is that this will be a positive experience for our readers as well as contributing to the growing body of evidence that DRM-free is the way forward for digital publishing.</i></blockquote></p>

<p>I'm told that this is the first DRM-free ebook from a mainstream author and major publisher in the UK.  Yeah! :)</p>

<p>The <a href="http://www.panmacmillan.com/picador/ManageBlog.aspx?BlogID=976ef340-9187-4c78-bead-fab2bda2c86e&BlogPage=Permalink">Picador blog</a> has more from the author himself.</p>]]>
        
    </content>
</entry>
<entry>
    <title>Hashtags, a scientific use case for Twitter.</title>
    <link rel="alternate" type="text/html" href="http://blogs.nature.com/wp/nascent/2008/04/hashtags_a_scientific_use_case.html" />
    <link rel="service.edit" type="application/atom+xml" href="http://blogs.nature.com/cgi-bin/mt/mt-atom.cgi/weblog/blog_id=6/entry_id=5107" title="Hashtags, a scientific use case for Twitter." />
    <id>tag:blogs.nature.com,2008:/wp/nascent//6.5107</id>
    
    <published>2008-04-07T14:41:20Z</published>
    <updated>2008-04-07T15:14:40Z</updated>
    
    <summary type="html"> Well, OK, perhaps I oversold this blog entry in the title a little, but what I want to describe is my experience of using Twitter during a conference, and how its use extended the experience of the conference. The...</summary>
    <author>
        <name>Ian Mulvany</name>
        
    </author>
    
    <content type="html" xml:lang="en" xml:base="http://blogs.nature.com/wp/nascent/">
        <![CDATA[<p><img alt="hashtagsOR08.png" src="http://blogs.nature.com/wp/nascent/hashtagsOR08.png" width="584" height="173" /></p>

<p>Well, OK, perhaps I oversold this blog entry in the title a little, but what I want to describe is my experience of using <a href="http://twitter.com/">Twitter</a> during a conference, and how its use extended the experience of the conference. The conference experience being so important for scientists means that this may well be a good scientific application for Twitter. <a href="http://www.hashtags.org/">Hashtags</a> is a site that tracks words prepended with a hash that appear on Twitter, and displays all of them on one page, with a small graph showing the rise and fall of usage of the tag over time. Last week I was at the <a href="http://or08.ecs.soton.ac.uk/">Open Repositories</a> meeting in Southampton and there were a good few people at the meeting using Twitter. We used the tag <a href="http://www.hashtags.org/tag/or08/">OR08</a>, and during the course of the meeting using the Hashtags site I was able to get a feel about what was going on in some of the other sessions, but even more interestingly during specific talks small micro conversations about the presentation emerged through Twitter. It was not only a fun experience, but it definitely enriched the experience of the conference.</p>

<p>
<a href="http://orweblog.oclc.org/">Lorcan Dempsey</a> recently described the idea of the <a href="http://orweblog.oclc.org/archives/001404.html">amplified conference</a>, where the adoption of new social media tools sends out tremors in the social graph of people who follow others attending various meetings, and I really like this model for what is going on here. Any one blog post, or tweet, on its own might pass below the radar, but a sudden burst tells the story that there might be something interesting going on. 
</p>

<p>Of course Twitter is not the only player in this space. <a href="http://eventtrack.info/">Eventtrack</a> also looks interesting (thanks Gavin!), and with many moves going on towards personal aggregation, over time more such sites are going to emerge. At the moment these aggregation sites are looking at event based trails through a message space. Each tweet is an event in this space, and the openness of Twitter makes it very easy to track the rise and fall of messages with specific tags. One could certainly think of academic papers as events in an academic paper-space. One wonders why there are not more trackers for signals and bursts in the scientific literature.</p>]]>
        
    </content>
</entry>

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