Editors’ Conference Calendar 2012

Below is a list of the conferences the Molecular Systems Biology editors will be attending in 2012.

Conference Place Date Editor
EMBL: Omics and Personalised Health Heidelberg Feb. 16-18 TL & ALH
Keystone: Complex Traits, Genomics and Computational Approaches Breckenridge Feb. 20-25 ALH
International Conference on the Systems Biology of Human Disease Heidelberg May 2-4 TL
CSHL: Systems Biology, Global Regulation of Gene Expression Cold Springs Harbor Mar. 20-24 TL
Keystone: Proteomics, Interactomes Stockholm May 7-12 ALH
The Sixth q-bio Conference Santa Fe Aug. 8-12 ALH
The 13th International Conference on Systems Biology Toronto Aug. 19-23 TL
HUPO 2012 Boston Sep. 9-13 ALH
EMBO: From Functional Genomics to Systems Biology Heidelberg Nov. 17-20 TBA

TL: Thomas Lemberger, ALH: Andrew L Hufton, TBA: to be announced

As usual, this schedule is subject to change, and we recognize that there are many excellent conferences that we will not be able to attend this year due to scheduling limitations.

Editors’ Conference Agenda – 2011

Here is a preliminary list of conferences that the Molecular Systems Biology editors will be attending in 2011. We are looking forward seeing a lot of the Alps this year, with meetings in Innsbruck, Geneva, and Vienna. And, of course, we also looking forward to meeting Molecular Systems Biology’s readers and authors; if you are attending one of these conferences or workshops, we would be quite happy to chat with you and learn about your research.

Naturally, this schedule is subject to change, and we recognize that there are many excellent conferences that we will not be able to attend this year due to scheduling limitations.

Conference Place Date Who
FEBSX-SysBio2011 Innsbruck Feb. 26-Mar. 3 ALH
CSHL Systems Biology: Networks Cold Spring Harbor Mar. 22-26 TL
International Conference on Systems Biology of Human Disease Boston June 22-24 TL
ISMB/ECCB Vienna July 17-19 ALH
Gordon Conference – Cellular Systems Biology Davidson July 24-29 TL
The Fifth q-bio Conference on Cellular Information Processing Santa Fe Aug. 10-13 ALH
12th International Conference on Systems Biology Heidelberg/Mannheim Aug. 28-Sept. 1 TL
HUPO 2011 Geneva Sept. 4-7 ALH
The EMBO Meeting Vienna Sept. 10-13 TL
EMBO | EMBL Symposium: Structure and Dynamics of Protein Networks Heidelberg Oct. 13-16 TL & ALH

TL: Thomas Lemberger, ALH: Andrew L. Hufton

Editors’ conference agenda

I spent May 14-15th at the Symposium on Integrative Network Biology and Cancer, hosted by the Institute of Cancer Research in London. The organizers, Chris Bakal and Rune Linding, managed to attract a stellar speakers list, and I had great discussions with many of the attendees. Inspired by this, I thought it could be useful to share a tentative list of conferences in 2010 that will be attended by the Molecular Systems Biology editors. If you happen to be at one these conferences, we would be delighted to meet you in person and hear about your research.

Please note that this is a tentative schedule. Moreover, please do not feel slighted if your favorite conference is not on this list. There are many high-quality conferences that we will not be able to attend this year due to scheduling limitations.

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Conference

Place

Date

Who Systems Biology & New Sequencing Technologies Barcelona June 16-18 TL 8th International Conference on Pathways, Networks, and Systems Medicine Rhodes July 9-14 TL <a href = “https://www.iscb.org/ismb2010”>ISMB 2010 Boston July 11-13 ALH q-bio Conference on Cellular Information Processing Santa Fe August 11-14 ALH The EMBO Meeting 2010 Barcelona Sept. 4-7 TL CSHL Personal Genomes Cold Spring Harbor Sept. 10-12 ALH HUPO2010 Sydney Sept. 19-23 TL 11th International Conference on Systems Biology Edinburgh Oct. 11-14 TL EMBO Conference: From Functional Genomics to Systems Biology Heidelberg Nov. 13-16 ALH Pharmacogenomics & Personalized Therapy Cold Spring Harbor Nov. 17-21 TL

TL: Thomas Lemberger, ALH: Andrew L. Hufton

Impact Factors 2008

The new Impact Factors 2008 were just released by Thomson Reuters (2008 Journal Citation Reports). We are delighted to announce that Molecular Systems Biology continues its progression, with an Impact Factor 2008 of 12.243.

We address a warm thank you to all our authors and reviewers for this wonderful success, which reflects the current extraordinary dynamism and enthusiasm in the fields of systems biology, synthetic biology and systems medicine!

The limitations of the Impact Factors (IF) have been largely discussed. In particular, it might be questionable to use IFs to rank journals with highly variable scopes, audiences and citation patterns. Moreover, article-centered metrics (such as individual citations, number of download, highlights in N&V, etc…) might be more appropriate to evaluate the contributions of individual researchers, rather than solely relying on the proxy provided by journal-based citation indexes. Nevertheless, when considering the variation of IF over time for a given journal, the impact of some of the confounding factors mentioned above might be reduced, at least to some extent. To facilitate exploration of the progression of IFs over the last five years, I include at the end of this post a Google Motion Chart to visualize IFs of a (rather subjective) selection of journals related to the fields of molecular and cell biology.

One observation that becomes apparent when toying around with this visualization, is that relatively few journals–in this selection!–see their IF raising over a period of 5 years, whereas many seem to be subject to a progressive erosion. This is also visible if one clusters the normalized time profiles, showing that the downward profile (in red) is frequent, at least within the selection used for the Motion Chart below (each curve is the cluster’s center with a thickness proportional to the number of journals in this cluster):

Why is that? It is hard to know. Perhaps, it might reflect some global effects affecting many journals at the same time: proliferation of new journals, changes in the pattern of citations directed to reviews rather than primary research, shift to citations of medically and clinically-oriented journals to highlight the medical relevance of the citing paper, etc… On the more positive side, those journals with upward progression (green curve above) may provide pointers to particularly dynamic fields.

In any case, given the above global trends, we are even more happy to open a bottle of Champagne to celebrate and enjoy the moment… 🙂

For an easy start with the exploration of the data, select ‘Impact Factor’ for the Y axis, ‘Time’ for the X axis, color by ‘up vs down’, ‘same size’ in the ‘size’ menu, check a few of your favorite journals (don’t forget to click on Mol Syst Biol!) and check the ‘Trail’ box. Press the ‘play’ button to start the animation. Interesting visualizations are also possible with the bar chart option (Click on second tab on top). See also instructions on the relevant Google Docs help page. Have fun!

Legend:

  • ‘IF’: impact factor
  • ‘IF-IF2004’: the Impact Factor 2004 (or the first available) was subtracted from all the other, to facilitate visualization of the progression
  • ‘up vs do’: +1 if IF2008>IF2004, -1 otherwise
  • ‘cluster #’ & ‘profile type’: 0=undefined because missing values, 1=profiles goes up then down, 2=down then up, 3=down, 4=up