Nature Precedings: One Year Later…

Nature Precedings launched back in June 2007 with the support of several partner organizations, including the British Library, the EBI, Science Commons, and the Wellcome Trust. Since then it’s been an exhilarating year. Wired described Nature Precedings as an island of innovation and several editorials in Nature journals throughout the past year have discussed how Nature Precedings can enhance scientific communication (see Community service, Virtual networking for microbiologists, Free market science, and Shared genomes).

Over the past year, researchers in a variety of disciplines, including genetics, neuroscience, bioinfomatics, and ecology have posted 475 documents and 180+ comments. Thousands of readers have signed up to comment, vote, and submit documents on the site, and we’ve seen steady growth in site traffic and posted documents. The Nature Precedings group on Nature Network has become a lively place with discussions on many topics including “findability” , posting negative results on Precedings and academic search engines.

In response to suggestions from you, our users and contributors, we’ve rolled out a number of new features, including comment notifications, an OAIPMH interface, and many usability enhancements.

To all of our visitors and supporters: Thank you! for helping turn the past year into a strong start for the project. The site relies upon your contributions for its success.

As we celebrate one year of Nature Precedings, we’ll be releasing new features on the site in the upcoming weeks and making some additional announcements. We look forward to the year ahead!

-The Nature Precedings Team

Connotea is a Database

Or, put another way, Connotea is for much more than just bibliographic references.

As Jon Udell so ably demonstrated in his recent post (Del.icio.us is a database), the ability to tag items with freely chosen keywords, coupled with the ability to mix-and-match queries on those tags, gives you a powerful database that is good enough for a large range of purposes.

Given that Connotea has these capabilities (and more besides — see below), can Connotea be used as a database too? Absolutely. And happily, Connotea users have already realised this and started applying it to their own specialised needs.

Continue reading

Social Bookmarking for Scientists at XTech 2006

Yesterday I give a talk at the XTech 2006 conference.

The talk was based on a paper I wrote for the conference: “Social Bookmarking for Scientists – The Best of Both Worlds”. The paper, together with the accompanying slides for the talk, gives an overview of how Connotea integrates existing academic publishing technologies with the new approaches of social bookmarking.

Connotea Developer Tools

We’ve just released NPG’s first public web service for developers — the Connotea Web API.

Connotea is our web-based social bookmarking and reference management service. The release of the Web API now allows any developer to create an application or web site that interacts with Connotea’s database of references and links.

For those of you who are programmers, we’ve also released some Perl and Ruby libraries to allow you to get started quickly.

If you want explore what’s possible with the Web API in more depth, have a look at the documentation on the Connotea Community Pages, or get in touch with us on connotea@nature.com or via the connotea-code-devel mailing list.

Tagging and Bookmarking In Institutional Repositories

If you’re familiar with Connotea, our free online information management tool, or with the general idea of social bookmarking then you’ll know what we mean when we say that we’ve released some software that adds tagging and social bookmarking to EPrints-based institutional repositories. On top of that, it uses tags and bookmarks to recommend related articles.

If not, then I’ll try to explain.

Continue reading

Nascent Will Be Down At The Weekend

A bunch of our servers are being moved at the weekend, and unfortunately this means that blogs.nature.com will be unavailable for a short time. You can expect Nascent to be absent from the Web from about 3pm EST on Friday 16th December until approximately 8pm EST on Saturday 17th.

I hope this doesn’t inconvenience you too much, and you can rest assured that we’ll be back up and blogging shortly after…