ISS crew spacewalk will repair broken pump

ISSTiny variations can sometimes have big results. Just ask the crew of the International Space Station (ISS). On 31 July, a spike in electric current shut down a 780-pound pump module responsible for feeding ammonia coolant into the station’s starboard cooling system.

The malfunction caused no risk to the flight crew as the port-side cooling system immediately began providing coolant for critical systems, such as life support. Following the spike, the crew worked overnight to install jumper cables from the ISS’s Destiny Lab to power other redundancy systems.

After an unsuccessful attempt to power down and restart the cooling system, NASA has decided to conduct a spacewalk on 6 August to replace the failed component for a spare. A second spacewalk, planned for Monday, will connect fluid and electricity to the repaired module.

NASA reports today that crew members are going about their normal work schedules but most planned activities this week have been canceled or deferred to prepare for the spacewalks.

And in case you were wondering which side is starboard when you’re in space (isn’t every side “starboard” in space?) you can refer to this handy graphic.

Image: NASA

Aliens And Spacey Things At The Royal Albert Hall

The poncey red drum at the heart of South Kensington is more readily associated with classical music, proms and Rule Britannia. Buton 25-31 October, the Royal Albert Hall will be invaded from space.

Visitors to the Close Encounters season can take part in an unusual programme of lectures, family activities, tours and music all themed around space and aliens. Highlights include:

Tickets are on sale now.

A dry dry food crisis?

Food in beaker HoW.jpgLast week’s Nature had a special report titled “Can science feed the world?”

That question is perhaps most relevant to the Middle East, arguably the driest area of the world – and home to one of the fastest growing populations. The 2008 food crisis, which sent prices skyrocketing through the roof, and led to a wave of riots in several countries around the world, was a wake up call for Arab states, especially those in the drier Gulf region. As countries like India reduced their food exports, residents of these countries for the first time realized the reality of going hungry.

This led to a change in policies. Qatar, for example, launched the Qatar National Food Security Programme to push for research and policy to feed the small state’s population. Saudi Arabia has recently been pushing to increase its agricultural production, albeit being mostly covered in desert.

The real challenge, however, remains the limited water resources. Arab states would be well-advised to invest their agricultural research into maximizing crop yield while minimizing water usage. Groundwater resources are already stressed, and the poorest countries, such as Yemen, are in danger of running out of water in the near future. Egypt and Sudan are already suffering water shortage risks due to decreased water flow in the Nile – with a risk of further decrease in the near future.

A commentary published in Nature Middle East a while ago explored the options the Middle East had to achieve food security.

The current track in agriculture in the Middle East region is unsustainable. While it may be a little far-fetched to think that the region may be able to reach full food sustainability through investments in research, it can do wonders to increase production. Newer technologies and agricultural techniques already available can increase yields several folds. Further investments can increase this even further. The fact that all the countries share a very similar challenge in this regard means that there is strong potential to sharing of technology amongst the states, spreading the costs wider.

Not only will the countries be assuring the food security of their fast increasing populations, but they will also be saving up on the most precious resource in the region, water.

Last chance! Wednesday’s Midsummer Night’s Science

At the Broad Institute, MIT and Harvard’s collaborative genomics research center, scientists have been sharing their works with all comers. Last week’s “”https://www.broadinstitute.org/events/publicevent/1468">Midsummer Night’s Science" series drew a full house of graduate students, professors and non-scientists interested in hearing about the genetics of heart disease.

So, Sekar Kathiresan had to tailor his talk to a mixed audience.

“MI is short for myocardial Infarction, which is the medical term for a heart attack,” he explained.

Then Kathiresan gradually ratcheted up the technical level as he went on to describe his lab’s effort to identify SNPs linked to heart disease. The scientists’ work, which revealed several promising genetic links to both heart attack risk and low LDL, is about to be published in Nature. (So, we won’t give you the details.)

The crowd seemed up to the talk, with many asking questions about how the research might lead to new treatments. (Answer – that will take a while.) And, as they filed out for a reception, younger scientists gathered around Kathiresan with more technical question.

But, don’t just go for the science and carrot cake. (The talk is followed by cheese, fruit and dessert spread .) The reception takes place in what Broad calls the “”https://www.broadinstitute.org/outreach/dnatrium/dnatrium">DNAtrium." Located in the glass-walled lobby in the middle of Kendall Square, the atrium includes a multi-screen, interactive exhibit about the Broad’s work. It’s a bit hyper-trade showish, but worth a look.

This week’s final talk starts at 6 pm Wednesday.Steve Haggarty will talk on "Keeping your brain plastic "

Your brain is a highly “plastic” organ capable of remarkable feats of adaptation. Intricate processes that allow the brain to adapt are essential for maintaining our mental health. Steve Haggarty will discuss how advances in areas of genetics, chemistry, and neuroscience are providing insights into the molecular nature of brain plasticity, and how this information could be used to develop new ways to treat memory and mood disorders.

Deepwater Horizon: it’s worse than you thought (again) – part 2

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The official estimate of the amount of oil that leaked into the Gulf of Mexico before BP managed to cap its ‘MC252’ well has again been revised upwards. The resulting new figure makes the incident the worst accidental spill in history.

US scientists now think that at the start of the disaster 62,000 barrels of oil a day were escaping the well, which began leaking after the explosion and sinking of the Deepwater Horizon drilling rig. Although this fell to 53,000 barrels per day by the time the well was capped on 15 July, a total of 4.9 million barrels probably escaped the well (press release).

Initially it was claimed that a mere 1,000 barrels per day were escaping (the history of the endlessly increasing estimates is contained in the original ‘it’s worse than you thought (again)’ blog post).

Of the 4.9 million barrels that leaked, some 800,000 were captured by BP, meaning ‘only’ 4.1 million barrels actually ended up polluting the Gulf. This is still more than the previous largest ever accidental spill – the Ixtoc 1 disaster, which released around 3.5 million barrels in the 1970s. Deliberate spilling during the first Gulf War is thought to have resulted in about 5 million barrels of spillage.

In other news, BP is still preparing for the ‘static kill’ of the well. This will involve attempting to permanently seal the well by forcing heavy mud downwards to drive back oil into the reservoir and allow the whole thing to be sealed off with cement. This is similar to the ‘top kill’ attempted earlier, except that the well is no longer flowing – hence ‘static’ (BP briefing).

If the static kill is successful a decision will have to be made as to whether to continue with the relief wells, which were previously thought to be the final answer to the leak.

Image: Q4000 vessel (shown centre) undertaking preparations for the ‘static kill’ / US Coast Guard photograph by Petty Officer 1st Class Adam Eggers.

International Congress of Vertebrate Morphology: Beaks and beyond

Posted on behalf of Anna Petherick

Arkhat Abzhanov is a naturalist at Harvard University who is, in some ways, making a career of going over old scientific ground. His recent published work puts a modern spin on the evolution of the finches that Darwin studied in the Galapagos Islands.

For such closely related species, Darwin’s finches have remarkably different beaks. Darwin explained their shapes through natural selection for beaks that enabled finches to consume the various foodstuffs available on the different islands.

During the last plenary session at the 9th International Congress of Vertebrate Morphology in Punta del Este, Uruguay, Abzhanov explained his work with Michael P. Brenner, a Harvard mathematician who works across the street from him in Boston. In February they published a paper showed that the beaks of Darwin’s finches are not as disparate as first meets the eye.

Instead, the species can be grouped by the curve of the upper beak. Within each of these groups, the equation for that curve need only be modified simply, by changing the curve’s length for example, to generate all of the beak shapes of the group’s member species. But between groups a more complicated shape transformation is needed, such as a ‘sheer’ or a ‘rotation’.

Knowing this, Abzhanov then pinned down signaling molecules that regulate where beak cartilage will form in early chick embryos, and showed that the expression of these molecules can be linked with some of the simple within-group shape changes.

But cartilage is only really important in defining the beak shapes of early chick embryos. Thereafter, a bone called the pre-maxillary bone creates the shape of the upper beak in all birds. At the conference, Abzhanov presented unpublished research on Geospiza (a genus of Galapagos finch) in which he identified the signaling molecules that influence how much bone forms, and where it forms on the beak’s cartilage scaffold.

Up- or down-regulating molecules called Dkk3, β-catenin and TGFβRII changed the length and width of the premaxillary bone forming in embryo beaks; another called Bmp4 affected its depth and width later on in development.

Can these same signaling molecules can also explain beak shape in another clade of birds? To answer this question, Abzhanov has turned to Caribbean bullfinches, which are close relatives of Darwin’s finches. He found that the beaks of Caribbean bullfinches can also be grouped according to the equation for the curve of the upper beak — and that a beak shape that he calls “the seed-cracking shape”, which is found in some Darwin’s finches, is also found in three species of Caribbean bullfinch.

Oddly, one of those three species did use the same biomolecular signaling to generate its ‘seed-cracking shape’ beak. It was the Caribbean bullfinch species most closely related Darwin’s finches out of the three. But the two other species employed a different biochemical signal of creating essentially the same morphological result.

Abzhanov has much many more details to grapple with in beak development, but in the long term he would like to expand his research to explain animal morphology in creatures other than birds. The field of work looks fertile because it ties modern molecular biology with another source of old scientific ground: D’Arcy Thompson’s notes on animal forms. This shows that basic mathematical transformations of the body plans of many species produce the forms of other species. Maybe but a few signaling molecules switch a puffer fish body plan into that of a sunfish?

Contentious MS treatment under fire

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Two new studies published today call into the question the controversial theory that multiple sclerosis (MS) is caused by blockages in jugular veins, an idea that has inspired many MS patients to undergo an experimental and as-yet unproven operation.

Most neuroimmunologists maintain that MS is an auto-immune disease caused by the body attacking the myelin sheath that protects neurons. But Paolo Zamboni, a vascular surgeon at the University of Ferrara in Italy, has been advocating a radically different view. He argues that MS is a vascular disease caused by iron deposits damaging the blood vessels in the neck, which allows the heavy metal and other toxins to block the blood-brain barrier — a condition he has dubbed ‘chronic cerebrospinal venous insufficiency’, or CCVI.

To remedy the problem, Zamboni has advanced an experimental surgery similar to balloon angioplasty to unclog veins and get blood flowing normally again. Zamboni has tested the treatment on a handful of people, including his MS-afflicted wife, and says that the symptoms of the disease have vanished in many of the patients.

But not everyone agrees with Zamboni’s theory. In independent studies published today in the Annals of Neurology, researchers from Germany and Sweden tested a combined total of 77 MS patients and 40 healthy controls, and found that blood flow was normal in all but one of the participants. Notably, although the Swedish researchers used magnetic resonance imaging with phase contrast to measure parameters of anomalous venous outflow, both the German group and Zamboni’s team relied on the same technique, one called extra- and trans-cranial color-coded sonography.

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Britain frets over ‘cloned milk’

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The UK’s Food Standards Agency has announced an investigation into reports that milk from the offspring of cloned cows has been sold to an unwitting public.

Last week the New York Times reported that an unnamed British dairy farmer was producing milk from a cow bred from a clone. The farmer also claimed to be selling embryos from the cow to Canadian breeders.

The FSA says its interpretation of the law leads it to believe that any animal product from a clone or the offspring of a clone would need to be authorised as a “novel food” before it was placed on the market. “As the UK authority responsible for accepting novel food applications, the Agency has not received any applications relating to cloning and no authorisations have been made,” it said in a statement released today, while promising to investigate any reports of such unauthorised foods.

Grahame Bulfield, former director of the Roslin Institute – famous as the place where Dolly the sheep was cloned – says, “Given that the farmer wishes to remain anonymous, it is very difficult to evaluate this story. So it should be taken with a pinch of salt. I don’t know of any cloned animals in the UK so I would be very suspicious.” (Comments distributed by the Science Media Centre.)

A number of scientists have insisted milk from any cloned cow – or cow with a cloned parent – should be entirely safe. One question remaining to be answered is what colour code cloned milk would end up with if it were to be approved (maybe black?).

Other reactions

Earlier this month the European Parliament voted to ban the sale of meat and dairy products from clones and their offspring. However, it has yet to pass into law.

Daily Telegraph

“The scientific opinion of Efsa – the European Food Safety Authority – confirms that there are no food safety risks posed by the products of offspring from cloned animals.”

Martin Haworth, director of policy at the National Farmers Union.

There was concern about calves from cloned parents three years ago when it emerged that a calf from a cloned cow was born on a British farm. … Later that year public outrage caused Dundee Paradise and her brother, Dundee Paratrooper, to be withdrawn from auction. It is thought they later went on sale privately.

The Guardian

“There is no genetic modification. It was for this reason that the FDA has approved consumption of milk and beef from the offspring of cloned cattle – they are just normal animals, and I do not understand the EU position on this. Obviously the FSA have their rules and need to look into what has happened, but it is more likely to be the milk of kindness than a horror story.”

Robin Lovell-Badge, Head of Stem Cell Biology and Developmental Genetics at the National Institute for Medical Research (via Science Media Centre).

“Outrageous! I shall be looking for French milk and French cheese from now on! The risk is just not worth it!”

Commenter on the Daily Mail website.

Image: photo by striatic via Flickr under creative commons.

Shark hunting on Amity Island

Welcome from NNMV – For a few days, Nature Network Boston is reporting from Martha’s Vineyard, which many people know as the stand in for “Amity Island” in the movie “Jaws.” And while that was a work of fiction, the great white shark has become a reality here in New England this summer.

On the other side of the Nantucket Sound, in beach in Chatham on the elbow of Cape Cod has been closed to swimmers are numerous great white shark sightings. And while this may have frightened bathers away, the seal -eating sharks have drawn another sort of water creature – marine biologists.

From _The Boston Globe _

CHATHAM — A longtime lobsterman, a retired Delta Air Lines pilot, and one of the world’s leading shark experts.

Last summer off the Chatham coast, they tagged five great white sharks in five days, the first great whites ever tagged in the western Atlantic; yesterday, they tagged another.

They are the state’s shark-research dream team.

George Breen finds the sharks, Bill Chaprales tags them, and Greg Skomal studies them.

“It’s a team effort. We’re all equally important — not one guy better than the other,‘’ said Chaprales, 58, of Marstons Mills, who was a commercial fisherman for 40 years off Cape Cod and claims a perfect record tagging fish with his harpoon. "Greg’s the biologist, my son drives the boat, I do the tagging, and George does the flying.’’

And with more and more great whites appearing off the Cape, these three men from different walks of life have the unique opportunity to unmask one the region’s most mystifying species.

Pictures here.

Everglades and Madagascan rainforest placed on UN ‘in danger’ list

everglades egret.jpgWhile the Galapagos last week controversially left the United Nations list of world heritage sites in danger, the Everglades and Madagascar’s forests have now been added.

The addition of the Everglades (pictured) is particularly sad, as it was only removed from the danger list by the UN Educational, Scientific and Cultural Organization in 2007. Since then though water flow to the US National Park has dropped massively and nutrient pollution has shot up.

Illegal logging and lemur hunting is behind the addition of the Rainforests of Atsinanana to the list. At its meeting in Brazil last week the UNESCO heritage committee pointed the finger of blame at the Madagascan government, saying, “despite a decree outlawing the exploitation and export or rosewood and ebony, Madagascar continues to provide export permits for illegally logged timber”.

New additions to the general list of world heritage sites have also been made:

Papahānaumokuākea islands off Hawaii

The central highlands of Sri Lanka

Ngorongoro Conservation Area in Tanzania

Bulgaria’s Pirin National Park (extension)

China Danxia

Kiribati’s Phoenix Islands Protected Area

The “pitons, cirques and remparts” of Reunion Island

Mexico’s prehistoric caves of Yagul and Mitla

Spain’s Palaeolithic Rock-Art Ensemble in Siega Verde

Image: a Great Egret in the Everglades / detail from National Park Service Photo by Rodney Cammauf.