In wake of Syrian chemical attacks, scientists seek to improve sarin antidotes

US Air Force officers administer a nerve agent autoinjector containing atropine and 2-PAM during a readiness exercise.

US Air Force officers administer a nerve agent autoinjector during a readiness exercise.{credit}US Air Force photo/Staff Sgt. Chrissy FitzGerald{/credit}

In the early hours of 21 August, doctors in Damascus area hospitals scrambled—often in vain—to save the lives of Syrian civilians brought to the hospital with foaming mouths and convulsions. Today, a report released by a United Nations inspection team confirms, as many have suspected, that the chemical weapon used in the attack was the deadly nerve gas sarin.

There are medical countermeasures proven to help counteract the poisoning of sarin and other organophosphate-based nerve agents such as soman and VX—some of which were available last month to Syrian victims. But “they have their limitations,” notes David Jett, director of the Countermeasures Against Chemical Threats (CounterACT) program at the US National Institutes of Health (NIH) in Bethesda, Maryland. Certain drug therapies don’t enter the brain well and none offers protection from the long-term effects of sarin exposure. So scientists have ratcheted up their efforts to improve the arsenal of antidotes against this particular chemical weapon and its lasting impact on the nervous system.

Sarin proves so fatal because it inhibits an enzyme called acetylcholinesterase (AChE). This enzyme normally degrades the neurotransmitter acetylcholine, a key signaling molecule that has numerous functions in the body, including facilitating cognitive function and triggering muscle contraction. Without functioning AChE, muscle fibers twitch uncontrollably and neurons in the brain become hyperactive, leading to seizures. If untreated, people exposed to sarin typically die of asphyxiation, as the muscles involved with breathing proceed to fire nonstop.

More than 1,400 people, including an estimated 426 children, died in the August gas attack, according to US intelligence estimates. Syrian doctors had only limited amounts of antidotes against the nerve gas, according to Sawsan Jabri, a trained physician who teaches biology courses at Oakland Community College in Eastern Michigan and serves as a spokeswoman for the US-based Syrian Expatriates Organization. She says that medical staff around Damascus (with whom she is in contact) had a total of some 50,000 ampoules of atropine, a drug that blocks the receptor responsible for binding acetylcholine, thereby preventing nerve and muscle cells from responding to the neurotransmitter. She adds that they also had “very limited amounts” of both pralidoxime (2-PAM)—a compound that reactivates sarin-inhibited AChE—and the anti-anxiety drug diazepam (better known as Valium), which prevents and treats seizures.

These three medicines—atropine, 2-PAM and diazepam—together constitute the ‘gold standard’ of anti-sarin therapies. As a matter of precaution, US military personnel are equipped with kits that contain spring-loaded syringes full of these antidotes, known as autoinjectors, which allow them to self-administer drugs through the muscle soon after, or better yet, before a chemical attack. But the therapeutic window is small, and prophylactic treatment is typically only feasible for military personnel, not civilians. So government defense agencies have long sought more robust and widely applicable alternatives to limit the death toll and mitigate permanent disability among survivors.

“There is a very vibrant research and development program in this area,” Jett says. He notes that the US government has been funding work in this area since “long before the chemical attacks in Syria, and even before the civilian attacks in Tokyo,” referring to the domestic terrorist attack on the Tokyo subway system in 1995, one of the first-ever uses of sarin as a chemical weapon. “We’re on this.”

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Bioengineered kidney makes urine after transplantation

Here’s research that could take the piss out of disease—and it’s no joke. For the first time, scientists reporting in Nature Medicine have created lab-grown kidneys in rats that produce urine after transplantation.

If the work can be replicated in humans, patients suffering from end-stage kidney disease could one day have “an organ that’s grown on demand—a tailored organ that can be transplanted and replaces the failing organ,” says study author Harald Ott, a bioengineer at the Massachusetts General Hospital in Boston.

New, intensive trials planned on heels of Mississippi HIV ‘cure’

Deborah Persaud

Deborah Persaud presented her findings at CROI. {credit}Johns Hopkins Medicine{/credit}

ATLANTA — Until recently, the medical community held a consensus that children born with HIV might be obliged to take antiretroviral drugs for the rest of their lives. But the announcement made last week that an infant in rural Mississippi who stopped receiving medicine at 18 months of age and has since lived for a year with no measurable viral RNA in the blood is prompting HIV experts to question the conventional wisdom.

“It’s definitely paradigm shifting,” says Deborah Persaud, a pediatric infectious disease physician at the Johns Hopkins Children’s Center in Baltimore who presented the Mississippi case here at the Conference on Retroviruses and Opportunistic Infections (CROI) on 4 March. However, a trial that involves drug cessation is fraught with ethical and medical difficulties, so the next steps going forward remain unclear.

Persaud and other HIV specialists plan to meet over three days in May at a leadership retreat of the International Maternal Pediatric Adolescent AIDS Clinical Trials (IMPAACT) group, an investigator network funded by the US National Institutes of Health (NIH), to discuss how best to test if and when antiretroviral therapy can be halted for children born with HIV who achieve undetectable levels of the virus in their blood. “We need community input on this,” Persaud says. “If we develop careful strategies, we could probably come up with a consensus approach in a couple of months.”

From Berlin to Mississippi

A prime benefit of going off antiretrovirals is the avoidance of drug-induced side effects, ranging from metabolic complications to bone demineralization to kidney failure. This is especially true for young people who could be on these medications from birth. Yet, before the Mississippi baby, no one had ever achieved a ‘functional cure’ from HIV—meaning undetectable viral replication and no disease progression in the absence of drugs—off the back of antiretroviral therapy alone. (Timothy Brown, the so-called ‘Berlin patient’, achieved this state, but only after a bone-marrow transplant with donor cells invulnerable to HIV replaced all of his native immune cells, a procedure deemed too risky for most HIV-positive individuals.)

The key to the baby’s functional cure, researchers believe, was probably the unconventionally aggressive treatment administered to the newborn in the first days of life: a trio of antiretroviral agents given twice daily starting from around 30 hours after birth. By giving these drugs before the infant had the chance to develop any memory T cells—the place where HIV goes to hide—this may have prevented the virus from establishing the latent reservoir that typically thwarts efforts at fully eliminating HIV from the body.

In contrast, most babies born to HIV-positive mothers today receive only a ‘prophylactic’ course of antiretroviral drugs to prevent infection. This typically involves fewer agents and less frequent dosing. Full treatment regimens are then given only after a positive diagnosis, which can take up to six weeks in many parts of the developing world.

Yet, in the case of the Mississippi baby, Hannah Gay, a pediatric HIV specialist at the University of Mississippi Medical Center in Jackson, put the newborn on the more aggressive regimen even before the tests came back showing that the child was infected. She did so out of the concern over the possibility of mother-to-child transmission, as the mother had never received prenatal care nor antiretroviral treatment. In fact, her HIV-positive status was only revealed to doctors while she was in labor. Following the baby’s diagnosis six days later, Gay maintained this intensive protocol with a slightly different drug cocktail going forward. Drug withdrawal was never planned. But after 18 months on the regimen, the child’s family stopped treatment for unspecified reasons. Surprisingly to Gay and her colleagues, the virus never rebounded.

“It’s always good to have your thinking jolted,” says Katherine Luzuriaga, of the University of Massachusetts Medical School in Worcester, who collaborated with Presaud and Gay in analyzing the Mississippi baby’s blood work.

Could other babies—around 1,000 of whom are newly infected globally each day with HIV—treated in a similar way now be functionally cured of their infection? A month ago, most researchers would have said no. Now, they’re not so sure.

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Q&A: How the Brain Activity Map came together—and what its proponents hope to achieve

{credit}Laura Luongo{/credit}

It was a single tweet. On 12 February, after US President Barack Obama made a subtle nod to a new neuroscience project in his annual State of the Union address, Francis Collins, director of the country’s National Institutes of Health (NIH), posted on the @NIHDirector Twitter feed: “Obama mentions the #NIH Brain Activity Map in #SOTU.” Instantly, scientists were buzzing with rumors that the Brain Activity Map could be the next moon shot, with a budget and timeline similar to the Human Genome Project.

The brain map began as a brief white paper and has grown into a large—and still largely undefined—collaboration of several government agencies, nonprofit foundations and private companies. As the stakeholders describe in a commentary slated to be published later this month, the goal of the initiative is to understand how thousands of neurons work in concert to control behavior and trigger disease. Miyoung Chun, vice president for science programs at The Kavli Foundation in Oxnard, California, has been developing the project since the beginning and is the self-described “glue” between its many diverse stakeholders. Chun (pictured) spoke with Virginia Hughes about the evolution of the project and what it might mean for biomedicine.

Were you surprised that President Obama mentioned the Brain Activity Map during his speech?

Absolutely. I had no idea that he was going to mention the project. All of us scientists who have been working so hard and talking about this issue for the past 18 months, we were writing emails to each other, we were calling each other, shouting, jumping. We were like, “Wow, he knows about this project? That’s amazing!”

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An ingestible pill-sized device offers a 3D view of the esophagus

Almost everyone gets occasional heartburn, that painful sensation in the chest or throat caused by the reflux of stomach acid back into the esophagus. When it happens too frequently, however, such as in patients with gastroesophageal reflux disease, it can result in a condition known as Barrett’s esophagus. An estimated 3 million Americans suffer from this disorder, where the tissue that lines the esophagus accumulates abnormal changes over time, increasing the risk for esophageal cancer.

Barrett’s esophagus often goes undiagnosed because it causes minor or nonexistent symptoms, and because of the procedure required to identify it. Currently, doctors must sedate a patient, insert a long, flexible camera known as an endoscope down the esophagus to look for abnormal tissue, and then cut off a small piece for analysis in a laboratory. The procedure is invasive, expensive and uncomfortable.

Now, researchers at the Massachusetts General Hospital (MGH) in Boston have invented a tethered, pill-sized endoscope that that allows doctors to construct an image of a person’s esophagus in microscopic detail within a few minutes—and all without anesthesia, intense training or causing pain. Their work was published today in Nature Medicine.

“A lot of people have reflux but don’t feel the pain of heartburn,” says MGH pathologist Gary Tearney, who led the study. These patients are at high risk for developing cancer, because they usually have no reason to get their esophagus inspected. “[Our device] really opens up screening to many more people,” Tearney says.

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VIDEO: ‘Resting state’ brain scans give diagnosis by default

Brain scans that map differences in how brain regions communicate while people lie idle in the imaging machine are providing a possible new way to diagnose attention disorders. Michael Milham of the Child Mind Institute in New York talks about the work being done on so-called ‘resting state’ brain scans and explains how they are expanding the field of functional MRI.

For more, check out our news feature on the clinical utility of resting state fMRI from the March 2012 issue of Nature Medicine.

VIDEO: Stem cell discovery puts women’s reproduction on fertile ground

Researchers have discovered a population of human ovarian stem cells with the potential of forming new eggs during a woman’s reproductive years. The findings, reported online today (26 February) in Nature Medicine, could lead to new therapies that help extend female fertility into late middle age and beyond.

“For women’s reproductive health these findings have so many ramifications,” says study author Jonathan Tilly, a reproductive biologist at the Massachusetts General Hospital and the Harvard Medical School in Boston. “If we can get to the stage of generating functional human eggs outside the body, it would essentially rewrite human assisted reproduction.”