TechBlog: Jupyter Joins the Galaxy

journal.pcbi.1005425.g001

{credit}PLoS Comput Biol 13(5):e1005425{/credit}

There’s a galaxy of tools in the Galaxy bioinformatics environment — 4,807 at last count. With them, researchers can do just about anything, computationally speaking. One thing they couldn’t do was work with their data programmatically. Now, thanks to a recent software update, that gap has been filled.

In a paper published on 25 May in PLoS Computational Biology, the Galaxy team describes a plug-in that provides access to both Jupyter (neé IPython notebook) and RStudio.

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